RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CSRNP1Q96S65 589 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 EHD4Q9H223 541 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 PI4KBQ9UBF8 816 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 SIPA1L1O43166 1804 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 SLC3A2P08195 630 aaKnown RBP21.67■■□□□ 1.06
RGP1-202ENST00000496906 FGRP09769 529 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 GABPAQ06546 454 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 KRT32Q14532 448 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 ADCK5Q3MIX3 580 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 STK11IPQ8N1F8 1099 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 DYNLL2Q96FJ2 89 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 PPP2R3BQ9Y5P8 575 aa21.67■■□□□ 1.06
RGP1-202ENST00000496906 NEDD4P46934 1319 aa21.66■■□□□ 1.06
RGP1-202ENST00000496906 POTEIP0CG38 1075 aa21.66■■□□□ 1.06
RGP1-202ENST00000496906 POTEJP0CG39 1038 aa21.66■■□□□ 1.06
RGP1-202ENST00000496906 C16orf86Q6ZW13 317 aa21.66■■□□□ 1.06
RGP1-202ENST00000496906 RNF41Q9H4P4 317 aaPredicted RBP21.66■■□□□ 1.06
RGP1-202ENST00000496906 INCENPQ9NQS7 918 aa21.66■■□□□ 1.06
RGP1-202ENST00000496906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
RGP1-202ENST00000496906 PCP11498 1178 aaKnown RBP21.65■■□□□ 1.06
RGP1-202ENST00000496906 MFSD6Q6ZSS7 791 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 METTL16Q86W50 562 aaKnown RBP21.65■■□□□ 1.06
RGP1-202ENST00000496906 PDE4BQ07343 736 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 SULF1Q8IWU6 871 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 SLC44A5Q8NCS7 719 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 JAKMIP1Q96N16 626 aaKnown RBP21.65■■□□□ 1.06
RGP1-202ENST00000496906 DNAJC18Q9H819 358 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 TAOK2Q9UL54 1235 aa21.65■■□□□ 1.06
RGP1-202ENST00000496906 ORC4O43929 436 aa21.64■■□□□ 1.05
RGP1-202ENST00000496906 CDK8P49336 464 aa21.64■■□□□ 1.05
RGP1-202ENST00000496906 KRT26Q7Z3Y9 468 aa21.64■■□□□ 1.05
RGP1-202ENST00000496906 FOXP4Q8IVH2 680 aaPredicted RBP21.64■■□□□ 1.05
RGP1-202ENST00000496906 ZNF784Q8NCA9 323 aaPredicted RBP21.64■■□□□ 1.05
RGP1-202ENST00000496906 NEK1Q96PY6 1258 aa21.64■■□□□ 1.05
RGP1-202ENST00000496906 TM6SF1Q9BZW5 370 aa21.64■■□□□ 1.05
RGP1-202ENST00000496906 ADM5C9JUS6 153 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 PRDM1O75626 825 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 SLURP2P0DP57 97 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 PSMA5P28066 241 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 COL9A3Q14050 684 aaPredicted RBP21.63■■□□□ 1.05
RGP1-202ENST00000496906 NCOA7Q8NI08 942 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 CNNM2Q9H8M5 875 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 GPBP1L1Q9HC44 474 aaPredicted RBP21.63■■□□□ 1.05
RGP1-202ENST00000496906 SWAP70Q9UH65 585 aa21.63■■□□□ 1.05
RGP1-202ENST00000496906 TRDNQ13061 729 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 NBPF12Q5TAG4 269 aaPredicted RBP21.62■■□□□ 1.05
RGP1-202ENST00000496906 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
RGP1-202ENST00000496906 NKX2-3Q8TAU0 364 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 KRT23Q9C075 422 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 ZNF287Q9HBT7 754 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 HERC5Q9UII4 1024 aaKnown RBP21.62■■□□□ 1.05
RGP1-202ENST00000496906 CLEC11AQ9Y240 323 aa21.62■■□□□ 1.05
RGP1-202ENST00000496906 POLR2AP24928 1970 aaKnown RBP21.62■■□□□ 1.05
RGP1-202ENST00000496906 FAM196BA6NMK8 535 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 B4E1Z4 1266 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 TBC1D12O60347 775 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 CASTP20810 708 aaKnown RBP21.61■■□□□ 1.05
RGP1-202ENST00000496906 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 RALYLQ86SE5 291 aaKnown RBP21.61■■□□□ 1.05
RGP1-202ENST00000496906 MB21D2Q8IYB1 491 aaPredicted RBP21.61■■□□□ 1.05
RGP1-202ENST00000496906 MKNK2Q9HBH9 465 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 ZSWIM6Q9HCJ5 1215 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 SHMT1P34896 483 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 MAP3K10Q02779 954 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 RRP12Q5JTH9 1297 aaKnown RBP21.61■■□□□ 1.05
RGP1-202ENST00000496906 CDC37L1Q7L3B6 337 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 TRIM34Q9BYJ4 488 aa21.61■■□□□ 1.05
RGP1-202ENST00000496906 HMGB1P09429 215 aaKnown RBP21.6■■□□□ 1.05
RGP1-202ENST00000496906 RASA1P20936 1047 aa21.6■■□□□ 1.05
RGP1-202ENST00000496906 RABEP1Q15276 862 aa21.6■■□□□ 1.05
RGP1-202ENST00000496906 BLOC1S2Q6QNY1 142 aa21.6■■□□□ 1.05
RGP1-202ENST00000496906 USP48Q86UV5 1035 aa21.6■■□□□ 1.05
RGP1-202ENST00000496906 ESR2Q92731 530 aa21.6■■□□□ 1.05
RGP1-202ENST00000496906 GLIS2Q9BZE0 524 aaPredicted RBP21.6■■□□□ 1.05
RGP1-202ENST00000496906 UPF3BQ9BZI7 483 aaKnown RBP21.6■■□□□ 1.05
RGP1-202ENST00000496906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.6■■□□□ 1.05
RGP1-202ENST00000496906 SSC5DA1L4H1 1573 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 KDM4AO75164 1064 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 CPA1P15085 419 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 NT5C2P49902 561 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 MAP1SQ66K74 1059 aaPredicted RBP21.59■■□□□ 1.05
RGP1-202ENST00000496906 TATDN1Q6P1N9 297 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 DLK2Q6UY11 383 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 RUFY3Q7L099 469 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 MIGA2Q7L4E1 593 aa21.59■■□□□ 1.05
RGP1-202ENST00000496906 RANBP6O60518 1105 aaKnown RBP21.58■■□□□ 1.05
RGP1-202ENST00000496906 RPS6KB1P23443 525 aa21.58■■□□□ 1.05
RGP1-202ENST00000496906 SUPT20HL1Q3ZLR7 823 aa21.58■■□□□ 1.05
RGP1-202ENST00000496906 DHX32Q7L7V1 743 aaKnown RBP21.58■■□□□ 1.05
RGP1-202ENST00000496906 HOOK2Q96ED9 719 aa21.58■■□□□ 1.05
RGP1-202ENST00000496906 KIF3CO14782 793 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 ANTXR2P58335 489 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 CYB5R4Q7L1T6 521 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
RGP1-202ENST00000496906 ZSWIM5Q9P217 1185 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 CYP46A1Q9Y6A2 500 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms