RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IRS2Q9Y4H2 1338 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 GOLGA6L19H0YKK7 550 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 UBE2Q2LH0YL09 131 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 MMP1P03956 469 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 CMA1P23946 247 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 CHAF1AQ13111 956 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 IQCB1Q15051 598 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 PLA2G4DQ86XP0 818 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 NUP133Q8WUM0 1156 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 ZNF830Q96NB3 372 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 CRNKL1Q9BZJ0 848 aaKnown RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 CDK5RAP2Q96SN8 1893 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 FGRP09769 529 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 PFKFB1P16118 471 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 ZNF75DP51815 510 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 PTPAQ15257 358 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 SAFBQ15424 915 aaKnown RBP eCLIP15.09■□□□□ 0.01
GARNL3-220ENST00000496711 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
GARNL3-220ENST00000496711 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 SPC24Q8NBT2 197 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 PIBF1Q8WXW3 757 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 ZSCAN10Q96SZ4 725 aaPredicted RBP15.09■□□□□ 0.01
GARNL3-220ENST00000496711 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
GARNL3-220ENST00000496711 AFF2P51816 1311 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 CYP2D7A0A087X1C5 515 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 SMIM22K7EJ46 135 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 WDHD1O75717 1129 aaPredicted RBP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 ADRA2BP18089 450 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 MARCKSP29966 332 aaPredicted RBP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 PRDX5P30044 214 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 GUCY1A2P33402 732 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 GRAPQ13588 217 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 NFIXQ14938 502 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 FAM196AQ6ZSG2 479 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 NOSTRINQ8IVI9 506 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 ENAHQ8N8S7 591 aaPredicted RBP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 TRIM5Q9C035 493 aa15.08■□□□□ 0.01
GARNL3-220ENST00000496711 AATFQ9NY61 560 aaKnown RBP eCLIP15.08■□□□□ 0.01
GARNL3-220ENST00000496711 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
GARNL3-220ENST00000496711 SARM1Q6SZW1 724 aa15.08■□□□□ 0
GARNL3-220ENST00000496711 IQCA1Q86XH1 822 aa15.08■□□□□ 0
GARNL3-220ENST00000496711 DIS3L2Q8IYB7 885 aaKnown RBP15.08■□□□□ 0
GARNL3-220ENST00000496711 RNF26Q9BY78 433 aaPredicted RBP15.08■□□□□ 0
GARNL3-220ENST00000496711 NAT10Q9H0A0 1025 aaKnown RBP15.08■□□□□ 0
GARNL3-220ENST00000496711 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0
GARNL3-220ENST00000496711 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
GARNL3-220ENST00000496711 BRWD3Q6RI45 1802 aa15.07■□□□□ 0
GARNL3-220ENST00000496711 ZNF202O95125 648 aa15.07■□□□□ 0
GARNL3-220ENST00000496711 IFIT1BQ5T764 474 aaKnown RBP15.07■□□□□ 0
GARNL3-220ENST00000496711 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
GARNL3-220ENST00000496711 FOXP1Q9H334 677 aaPredicted RBP15.07■□□□□ 0
GARNL3-220ENST00000496711 DCP1AQ9NPI6 582 aaPredicted RBP15.07■□□□□ 0
GARNL3-220ENST00000496711 KIAA1468Q9P260 1216 aa15.07■□□□□ 0
GARNL3-220ENST00000496711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.07■□□□□ 0
GARNL3-220ENST00000496711 BECN2A8MW95 431 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 USP17L12C9JPN9 530 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 USP17L21D6R901 530 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 ORC4O43929 436 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 ONECUT3O60422 494 aaPredicted RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 IGSF3O75054 1194 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 CDC25BP30305 580 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 ZRSR1Q15695 479 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 CATIPQ7Z7H3 387 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 DZIP1Q86YF9 867 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 TIGD1Q96MW7 591 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 KCNF1Q9H3M0 494 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 HPSEQ9Y251 543 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 LEMD3Q9Y2U8 911 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 XDHP47989 1333 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 FAM237AA0A1B0GTK4 181 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 BTBD18B2RXH4 712 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 CUTAO60888 179 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 PRDM1O75626 825 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 TPM2P07951 284 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 SLC3A2P08195 630 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 CALM1P0DP23 149 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 CALM2P0DP24 149 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 CALM3P0DP25 149 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 TERF1P54274 439 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 DHX40Q8IX18 779 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 CMTR1Q8N1G2 835 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 ERCC4Q92889 916 aaPredicted RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 RBM28Q9NW13 759 aaKnown RBP15.06■□□□□ 0
GARNL3-220ENST00000496711 KCNJ14Q9UNX9 436 aa15.06■□□□□ 0
GARNL3-220ENST00000496711 DDAH1O94760 285 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 SYKP43405 635 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 AKAP17AQ02040 695 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms