RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 PHIPQ8WWQ0 1821 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
PDAP1-204ENST00000496335 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
PDAP1-204ENST00000496335 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
PDAP1-204ENST00000496335 SLFNL1Q499Z3 407 aa17.57■□□□□ 0.4
PDAP1-204ENST00000496335 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
PDAP1-204ENST00000496335 DHX36Q9H2U1 1008 aaKnown RBP17.57■□□□□ 0.4
PDAP1-204ENST00000496335 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
PDAP1-204ENST00000496335 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 USP5P45974 858 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 MOGSQ13724 837 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 TMED8Q6PL24 325 aaPredicted RBP17.56■□□□□ 0.4
PDAP1-204ENST00000496335 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
PDAP1-204ENST00000496335 ECHDC1Q9NTX5 307 aa17.56■□□□□ 0.4
PDAP1-204ENST00000496335 PTPRFP10586 1907 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 MYH7P12883 1935 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 MAGEB6P1A0A0J9YX57 407 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 CCDC85CA6NKD9 419 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 CERS3Q8IU89 383 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 ZFYVE28Q9HCC9 887 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 HERC5Q9UII4 1024 aaKnown RBP17.55■□□□□ 0.4
PDAP1-204ENST00000496335 AFG3L2Q9Y4W6 797 aa17.55■□□□□ 0.4
PDAP1-204ENST00000496335 CXCL11O14625 94 aa17.54■□□□□ 0.4
PDAP1-204ENST00000496335 CHGBP05060 677 aa17.54■□□□□ 0.4
PDAP1-204ENST00000496335 CAP2P40123 477 aa17.54■□□□□ 0.4
PDAP1-204ENST00000496335 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
PDAP1-204ENST00000496335 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 PDHXO00330 501 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 ADD2P35612 726 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 JAG1P78504 1218 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 ANKRD23Q86SG2 305 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
PDAP1-204ENST00000496335 LCORLQ8N3X6 602 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
PDAP1-204ENST00000496335 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
PDAP1-204ENST00000496335 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
PDAP1-204ENST00000496335 HLA-DOAP06340 250 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 CAP1Q01518 475 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 SP3Q02447 781 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
PDAP1-204ENST00000496335 ZCCHC17Q9NP64 241 aaKnown RBP17.52■□□□□ 0.4
PDAP1-204ENST00000496335 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
PDAP1-204ENST00000496335 TLR2O60603 784 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
PDAP1-204ENST00000496335 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
PDAP1-204ENST00000496335 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 EXOC6Q8TAG9 804 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
PDAP1-204ENST00000496335 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.394e-10■□□□□ 8.1
PDAP1-204ENST00000496335 TRIM17Q9Y577 477 aa17.51■□□□□ 0.39
PDAP1-204ENST00000496335 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
PDAP1-204ENST00000496335 PRKAB2O43741 272 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 MBD4O95243 580 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 GDF11O95390 407 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 EVX2Q03828 476 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 SPP2Q13103 211 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
PDAP1-204ENST00000496335 PKN2Q16513 984 aaKnown RBP17.5■□□□□ 0.39
PDAP1-204ENST00000496335 OTOP1Q7RTM1 612 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 SDR42E1Q8WUS8 393 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
PDAP1-204ENST00000496335 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
PDAP1-204ENST00000496335 BAZ2AQ9UIF9 1905 aaKnown RBP17.49■□□□□ 0.39
PDAP1-204ENST00000496335 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 PLCD1P51178 756 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 FASTKD5Q7L8L6 764 aaKnown RBP17.49■□□□□ 0.39
PDAP1-204ENST00000496335 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 MCM9Q9NXL9 1143 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 CPA4Q9UI42 421 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 HPS5Q9UPZ3 1129 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
PDAP1-204ENST00000496335 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
PDAP1-204ENST00000496335 CYP2C8P10632 490 aa17.48■□□□□ 0.39
PDAP1-204ENST00000496335 ZSCAN25Q6NSZ9 544 aa17.48■□□□□ 0.39
PDAP1-204ENST00000496335 ZNF280CQ8ND82 737 aa17.48■□□□□ 0.39
PDAP1-204ENST00000496335 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
PDAP1-204ENST00000496335 SERPINB13Q9UIV8 391 aa17.48■□□□□ 0.39
PDAP1-204ENST00000496335 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
PDAP1-204ENST00000496335 ASNSP08243 561 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 FBXO46Q6PJ61 603 aaPredicted RBP17.47■□□□□ 0.39
PDAP1-204ENST00000496335 C17orf99Q6UX52 265 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 ARHGAP39Q9C0H5 1083 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 PUS7LQ9H0K6 701 aaKnown RBP17.47■□□□□ 0.39
PDAP1-204ENST00000496335 EHD4Q9H223 541 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 ZBTB21Q9ULJ3 1066 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms