RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	MAP4K4	O95819	1239 aa	Predicted RBP	19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	MAP3K9	P80192	1104 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SLC4A8	Q2Y0W8	1093 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SLFNL1	Q499Z3	407 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SLC9C1	Q4G0N8	1177 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	MIGA1	Q8NAN2	632 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ELP3	Q9H9T3	547 aa		19.23	■□□□□ 0.67
PRKCZ-222	ENST00000496325	COL6A3	P12111	3177 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ATRNL1	Q5VV63	1379 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	UNCX	A6NJT0	531 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	NPM3	O75607	178 aa	Known RBP	19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	PDE6A	P16499	860 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	VGLL4	Q14135	290 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SLC9C2	Q5TAH2	1124 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SLC17A8	Q8NDX2	589 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	SH3TC2	Q8TF17	1288 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	CNKSR2	Q8WXI2	1034 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	HOOK2	Q96ED9	719 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ZNF341	Q9BYN7	854 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	PHIP	Q8WWQ0	1821 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	DOCK1	Q14185	1865 aa		19.22	■□□□□ 0.67
PRKCZ-222	ENST00000496325	TCRBV5S4A2T	A0A5A2	114 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	TESPA1	A2RU30	521 aa	Predicted RBP	19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	CHGB	P05060	677 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	DCAF15	Q66K64	600 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	TGFBRAP1	Q8WUH2	860 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ZKSCAN4	Q969J2	545 aa	Predicted RBP	19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	WRNIP1	Q96S55	665 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ARHGAP39	Q9C0H5	1083 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	OSBPL5	Q9H0X9	879 aa	Predicted RBP	19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	RWDD1	Q9H446	243 aa	Predicted RBP	19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	ZNF532	Q9HCE3	1301 aa		19.21	■□□□□ 0.67
PRKCZ-222	ENST00000496325	PTPRF	P10586	1907 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	PLCG2	P16885	1265 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	INPP5B	P32019	993 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MAPKAPK5	Q8IW41	473 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SMC5	Q8IY18	1101 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MS4A4A	Q96JQ5	239 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	ZNF112	Q9UJU3	913 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SALL3	Q9BXA9	1300 aa		19.2	■□□□□ 0.66
PRKCZ-222	ENST00000496325	B4GALNT3	Q6L9W6	998 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	PI4K2B	Q8TCG2	481 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SHISA4	Q96DD7	197 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	GPATCH3	Q96I76	525 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	RIOK1	Q9BRS2	568 aa	Known RBP	19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SNCAIP	Q9Y6H5	919 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MYH8	P13535	1937 aa		19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	DDX60L	Q5H9U9	1706 aa	Known RBP	19.19	■□□□□ 0.66
PRKCZ-222	ENST00000496325	COL2A1	P02458	1487 aa	Predicted RBP	19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	ADD2	P35612	726 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MAP3K10	Q02779	954 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	OTUD7B	Q6GQQ9	843 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	BRI3BP	Q8WY22	251 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	OPTN	Q96CV9	577 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	CSAD	Q9Y600	493 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	FLT1	P17948	1338 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	TTC41P	Q6P2S7	1318 aa		19.18	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MAGEB6P1	A0A0J9YX57	407 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	FAM196B	A6NMK8	535 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	PHF20L1	A8MW92	1017 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MX1	P20591	662 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	TMED8	Q6PL24	325 aa	Predicted RBP	19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	NBPF11	Q86T75	865 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	LNPK	Q9C0E8	428 aa		19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	ZBTB47	Q9UFB7	747 aa	Predicted RBP	19.17	■□□□□ 0.66
PRKCZ-222	ENST00000496325	ECM2	O94769	699 aa	Predicted RBP	19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	MTFR1	Q15390	333 aa		19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	TAF1C	Q15572	869 aa	Predicted RBP	19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	FAM43A	Q8N2R8	423 aa		19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	PRO3102	Q9H379	93 aa		19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SAP30BP	Q9UHR5	308 aa	Known RBP	19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	PALD1	Q9ULE6	856 aa		19.16	■□□□□ 0.66
PRKCZ-222	ENST00000496325	USP5	P45974	858 aa		19.15	■□□□□ 0.66
PRKCZ-222	ENST00000496325	LCORL	Q8N3X6	602 aa		19.15	■□□□□ 0.66
PRKCZ-222	ENST00000496325	DPF3	Q92784	378 aa		19.15	■□□□□ 0.66
PRKCZ-222	ENST00000496325	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.15	■□□□□ 0.66
PRKCZ-222	ENST00000496325	SPDYE5	A6NIY4	337 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	ERC2	O15083	957 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	TBC1D12	O60347	775 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	ERO1B	Q86YB8	467 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	KBTBD3	Q8NAB2	608 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	ARMT1	Q9H993	441 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	LAMA3	Q16787	3333 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325		A0A0C4DFX4	3053 aa		19.14	■□□□□ 0.65
PRKCZ-222	ENST00000496325	CCL15-CCL14	A0A0B4J2E2	113 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	SOX1	O00570	391 aa	Predicted RBP	19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	GLRX3	O76003	335 aa	Known RBP	19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	PDE1A	P54750	535 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	RRP1B	Q14684	758 aa	Known RBP	19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	UBE3C	Q15386	1083 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	CCL15	Q16663	113 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	NOL9	Q5SY16	702 aa	Known RBP	19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	CERS3	Q8IU89	383 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	DHX36	Q9H2U1	1008 aa	Known RBP	19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	19.13	■□□□□ 0.65	2e-11	■■■■■ 27.2
PRKCZ-222	ENST00000496325	PI4KB	Q9UBF8	816 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	STAP2	Q9UGK3	403 aa		19.13	■□□□□ 0.65
PRKCZ-222	ENST00000496325	IRF6	O14896	467 aa		19.12	■□□□□ 0.65
PRKCZ-222	ENST00000496325	MBD4	O95243	580 aa		19.12	■□□□□ 0.65

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms