RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 NUCB2P80303 420 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 EVI5LQ96CN4 794 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 FOXP4Q8IVH2 680 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 FAM84BQ96KN1 310 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 SKOR2Q2VWA4 1001 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 EPHA10Q5JZY3 1008 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 OSBPL5Q9H0X9 879 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 PI4KBQ9UBF8 816 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 MYPNQ86TC9 1320 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 CNGA1P29973 690 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 LRRC24Q50LG9 513 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 L1TD1Q5T7N2 865 aaKnown RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 TRIM75PA6NK02 468 aa10.05□□□□□ -0.8
VPS13B-206ENST00000496144 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 ZCCHC17Q9NP64 241 aaKnown RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 ASNSP08243 561 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 PUS3Q9BZE2 481 aaKnown RBP10.04□□□□□ -0.8
VPS13B-206ENST00000496144 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
VPS13B-206ENST00000496144 SCYL3Q8IZE3 742 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 ZDHHC15Q96MV8 337 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 CUL4AQ13619 759 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 NBPF12Q5TAG4 269 aaPredicted RBP10.04□□□□□ -0.8
VPS13B-206ENST00000496144 MRIQ9BWK5 157 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
VPS13B-206ENST00000496144 ARAP2Q8WZ64 1704 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 KCNQ5Q9NR82 932 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 SLX4Q8IY92 1834 aa10.04□□□□□ -0.8
VPS13B-206ENST00000496144 C19orf81C9J6K1 198 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 COPB2P35606 906 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 NEK4P51957 841 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 TLR7Q9NYK1 1049 aaKnown RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 PDE4BQ07343 736 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 ANKRD23Q86SG2 305 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 DNAJC5GQ8N7S2 189 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 KCNB2Q92953 911 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 HIP1O00291 1037 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 CWC27Q6UX04 472 aaKnown RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 ZNF296Q8WUU4 475 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 FSD1Q9BTV5 496 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 LAMB2P55268 1798 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 ERICH2A1L162 156 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 POTECB2RU33 542 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 ZBED4O75132 1171 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 SLAIN1Q8ND83 568 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 EAF2Q96CJ1 260 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 INTS4Q96HW7 963 aaKnown RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 GPR108Q9NPR9 543 aa10.03□□□□□ -0.8
VPS13B-206ENST00000496144 SAP30BPQ9UHR5 308 aaKnown RBP10.03□□□□□ -0.8
VPS13B-206ENST00000496144 ZEB2O60315 1214 aa10.02□□□□□ -0.8
VPS13B-206ENST00000496144 MAGEB6Q8N7X4 407 aa10.02□□□□□ -0.8
VPS13B-206ENST00000496144 SWAP70Q9UH65 585 aa10.02□□□□□ -0.8
VPS13B-206ENST00000496144 PDHXO00330 501 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 TGFBRAP1Q8WUH2 860 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 TTC14Q96N46 770 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 TMEM39BQ9GZU3 492 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 DIAPH3Q9NSV4 1193 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 AATFQ9NY61 560 aaKnown RBP eCLIP10.02□□□□□ -0.815e-6■■■■□ 19.3
VPS13B-206ENST00000496144 MROH7-TTC4A0A0A0MT08 1334 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 GNAT2P19087 354 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 CST9Q5W186 159 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
VPS13B-206ENST00000496144 MCM9Q9NXL9 1143 aa10.02□□□□□ -0.81
VPS13B-206ENST00000496144 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 ZKSCAN1P17029 563 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 ZDHHC9Q9Y397 364 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 SHTN1A0MZ66 631 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 PSMC4P43686 418 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 TNNI3KQ59H18 835 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 KLHDC4Q8TBB5 520 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 FPGT-TNNI3KV9GXZ4 949 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 MYH3P11055 1940 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 ZNF609O15014 1411 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 LAMA4Q16363 1823 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 TM4SF4P48230 202 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 HIRAP54198 1017 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 TRDNQ13061 729 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms