RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TMTC2Q8N394 836 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 FLAD1Q8NFF5 587 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
USP39-219ENST00000496047 WASF1Q92558 559 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 RBM17Q96I25 401 aaKnown RBP8.09□□□□□ -1.11
USP39-219ENST00000496047 SPATA32Q96LK8 384 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 STRBPQ96SI9 672 aaKnown RBP8.09□□□□□ -1.11
USP39-219ENST00000496047 TSPY26PQ9H489 355 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 SPON1Q9HCB6 807 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 TOMM22Q9NS69 142 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 ANGEL1Q9UNK9 670 aaKnown RBP8.09□□□□□ -1.11
USP39-219ENST00000496047 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 CNPY2Q9Y2B0 182 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 LEMD3Q9Y2U8 911 aa8.09□□□□□ -1.11
USP39-219ENST00000496047 MYH4Q9Y623 1939 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 METAP2P50579 478 aaKnown RBP eCLIP8.08□□□□□ -1.122e-7■■■□□ 16.1
USP39-219ENST00000496047 EVCP57679 992 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 GNL2Q13823 731 aaKnown RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 AKNAD1Q5T1N1 836 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 NSUN7Q8NE18 718 aaKnown RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 STAG1Q8WVM7 1258 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 EPAS1Q99814 870 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 LRRC2Q9BYS8 371 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 CRNKL1Q9BZJ0 848 aaKnown RBP8.08□□□□□ -1.12
USP39-219ENST00000496047 ARMT1Q9H993 441 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 COL4A1P02462 1669 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 PSME4Q14997 1843 aa8.08□□□□□ -1.12
USP39-219ENST00000496047 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 GOLGA8AA7E2F4 631 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 ZBTB43O43298 467 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 CHGBP05060 677 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 LDHCP07864 332 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 HSPA6P17066 643 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 PDIA3P30101 505 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 GYG1P46976 350 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 RCAN1P53805 252 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 KCNQ4P56696 695 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 CCT2P78371 535 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 DNM1Q05193 864 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 ST3GAL1Q11201 340 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 PPP2R5BQ15173 497 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 SLFNL1Q499Z3 407 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 TMEM67Q5HYA8 995 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 TTLL5Q6EMB2 1281 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 GPT2Q8TD30 523 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 ESR2Q92731 530 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 DDX12PQ92771 950 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 C8orf76Q96K31 380 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 UBAC1Q9BSL1 405 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 DDX19AQ9NUU7 478 aaKnown RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 ARPP21Q9UBL0 812 aaPredicted RBP8.07□□□□□ -1.12
USP39-219ENST00000496047 TAF6LQ9Y6J9 622 aa8.07□□□□□ -1.12
USP39-219ENST00000496047 DDX60LQ5H9U9 1706 aaKnown RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 SYCE3A1L190 88 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 B4E1Z4 1266 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 SH2B2O14492 632 aaPredicted RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 IFIT3O14879 490 aaKnown RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 JAK2O60674 1132 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 BAG3O95817 575 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 CALM1P0DP23 149 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 CALM2P0DP24 149 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 CALM3P0DP25 149 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 XBP1P17861 261 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 LIFRP42702 1097 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 EN1Q05925 392 aaPredicted RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 NFIXQ14938 502 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 WTAPQ15007 396 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 BRAPQ7Z569 592 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 IQCA1Q86XH1 822 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 LCORLQ8N3X6 602 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 ORC3Q9UBD5 711 aaPredicted RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 SLC12A7Q9Y666 1083 aa8.06□□□□□ -1.12
USP39-219ENST00000496047 COL1A1P02452 1464 aaPredicted RBP8.06□□□□□ -1.12
USP39-219ENST00000496047 SALL1Q9NSC2 1324 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms