RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 SAP30BPQ9UHR5 308 aaKnown RBP28.65■■■□□ 2.18
PPP1R3F-205ENST00000495799 RANBP6O60518 1105 aaKnown RBP28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 WDHD1O75717 1129 aaPredicted RBP28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 PDIA3P30101 505 aaKnown RBP28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 CXCL9Q07325 125 aa28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 WTAPQ15007 396 aa28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 CFAP100Q494V2 611 aa28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 LLPHQ9BRT6 129 aaKnown RBP28.64■■■□□ 2.18
PPP1R3F-205ENST00000495799 DHX16O60231 1041 aaKnown RBP28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 NPM3O75607 178 aaKnown RBP28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 PDIA4P13667 645 aaKnown RBP28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 ST3GAL1Q11201 340 aa28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 PICALMQ13492 652 aa28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 RAB3GAP1Q15042 981 aa28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 NFXL1Q6ZNB6 911 aa28.64■■■□□ 2.17
PPP1R3F-205ENST00000495799 CCDC69A6NI79 296 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 EIF6P56537 245 aaKnown RBP28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 RASSF7Q02833 373 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 SYNE3Q6ZMZ3 975 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 IDI2Q9BXS1 227 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 LY9Q9HBG7 655 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 MKNK2Q9HBH9 465 aa28.63■■■□□ 2.17
PPP1R3F-205ENST00000495799 GOLGA8BA8MQT2 603 aa28.62■■■□□ 2.17
PPP1R3F-205ENST00000495799 RPS12P25398 132 aaKnown RBP28.62■■■□□ 2.17
PPP1R3F-205ENST00000495799 OSBPL5Q9H0X9 879 aaPredicted RBP28.62■■■□□ 2.17
PPP1R3F-205ENST00000495799 GPHNQ9NQX3 736 aaPredicted RBP28.62■■■□□ 2.17
PPP1R3F-205ENST00000495799 HLA-DOAP06340 250 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 SCRN1Q12765 414 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 CCDC178Q5BJE1 867 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 C16orf86Q6ZW13 317 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 TMOD2Q9NZR1 351 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 TAOK2Q9UL54 1235 aa28.61■■■□□ 2.17
PPP1R3F-205ENST00000495799 PRDM1O75626 825 aa28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 GJB2P29033 226 aa28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 DLGAP5Q15398 846 aa28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 NKX2-3Q8TAU0 364 aa28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 ZSCAN10Q96SZ4 725 aaPredicted RBP28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 BRPF3Q9ULD4 1205 aa28.6■■■□□ 2.17
PPP1R3F-205ENST00000495799 TSPY2A6NKD2 308 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 SMIM22K7EJ46 135 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 PLCD1P51178 756 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 SLC4A8Q2Y0W8 1093 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 ZNF444Q8N0Y2 327 aaPredicted RBP28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 DHX36Q9H2U1 1008 aaKnown RBP28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 DDX4Q9NQI0 724 aaKnown RBP28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 KIF3AQ9Y496 699 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 TNKSO95271 1327 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 PDCP20941 246 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 RCAN1P53805 252 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 HMGN5P82970 282 aaKnown RBP28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 MTMR14Q8NCE2 650 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 SYT17Q9BSW7 474 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 ZBTB12Q9Y330 459 aaPredicted RBP28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 SLC12A7Q9Y666 1083 aa28.59■■■□□ 2.17
PPP1R3F-205ENST00000495799 ZBTB43O43298 467 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 APOA5Q6Q788 366 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 ARHGAP27Q6ZUM4 889 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 DYNLL2Q96FJ2 89 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 ZKSCAN3Q9BRR0 538 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 SWAP70Q9UH65 585 aa28.58■■■□□ 2.17
PPP1R3F-205ENST00000495799 SPDYE2BA6NHP3 402 aa28.57■■■□□ 2.16
PPP1R3F-205ENST00000495799 FZD9O00144 591 aa28.57■■■□□ 2.16
PPP1R3F-205ENST00000495799 SPDYE6P0CI01 402 aa28.57■■■□□ 2.16
PPP1R3F-205ENST00000495799 CCT2P78371 535 aaKnown RBP28.57■■■□□ 2.16
PPP1R3F-205ENST00000495799 EVX2Q03828 476 aa28.57■■■□□ 2.16
PPP1R3F-205ENST00000495799 DICER1Q9UPY3 1922 aaKnown RBP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 COL2A1P02458 1487 aaPredicted RBP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 WDR33Q9C0J8 1336 aaKnown RBP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 ENTPD3O75355 529 aa28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 CDK8P49336 464 aa28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 METAP2P50579 478 aaKnown RBP eCLIP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 SEC23AQ15436 765 aa28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 IFIT1BQ5T764 474 aaKnown RBP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 CPLX2Q6PUV4 134 aaKnown RBP28.56■■■□□ 2.16
PPP1R3F-205ENST00000495799 LMNB1P20700 586 aa28.55■■■□□ 2.16
PPP1R3F-205ENST00000495799 SMARCC2Q8TAQ2 1214 aa28.55■■■□□ 2.16
PPP1R3F-205ENST00000495799 TDRD3Q9H7E2 651 aaKnown RBP28.55■■■□□ 2.16
PPP1R3F-205ENST00000495799 PCDHAC2Q9Y5I4 1007 aa28.55■■■□□ 2.16
PPP1R3F-205ENST00000495799 NID2Q14112 1375 aa28.55■■■□□ 2.16
PPP1R3F-205ENST00000495799 CPLX1O14810 134 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 CDKL5O76039 1030 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 TSPY3P0CV98 308 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 TSPY8P0CW00 308 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 TFAP4Q01664 338 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 NFIAQ12857 509 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 PRMT6Q96LA8 375 aaPredicted RBP28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 EHD4Q9H223 541 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 HPS5Q9UPZ3 1129 aa28.54■■■□□ 2.16
PPP1R3F-205ENST00000495799 MYO1BO43795 1136 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 PPP2R5BQ15173 497 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 FAM47AQ5JRC9 791 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 ENAHQ8N8S7 591 aaPredicted RBP28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 FAM184AQ8NB25 1140 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 NSUN7Q8NE18 718 aaKnown RBP28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 TNPO1Q92973 898 aaKnown RBP28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 GBP4Q96PP9 640 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 TCP11L1Q9NUJ3 509 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 SERPINB13Q9UIV8 391 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 GOLGA8AA7E2F4 631 aa28.53■■■□□ 2.16
PPP1R3F-205ENST00000495799 BRD1O95696 1058 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms