RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 LOC285556D6RIA3 1793 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 INHAP05111 366 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 UBXN2AP68543 259 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 JAG1P78504 1218 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 GORABQ5T7V8 394 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 ATF7IPQ6VMQ6 1270 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 SH3RF3Q8TEJ3 882 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 SNRKQ9NRH2 765 aa14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-206ENST00000495680 SZT2Q5T011 3432 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 RANBP2P49792 3224 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 COL2A1P02458 1487 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 HMGCS2P54868 508 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 ADGRA1Q86SQ6 560 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 NKX2-3Q8TAU0 364 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
SHROOM1-206ENST00000495680 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 PEX10O60683 326 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 FARP2O94887 1054 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 SGPL1O95470 568 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 LDHCP07864 332 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 CAP2P40123 477 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 GSTO1P78417 241 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 IRF5Q13568 498 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 AATFQ9NY61 560 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-206ENST00000495680 MAST2Q6P0Q8 1798 aa14.83□□□□□ -0.03
SHROOM1-206ENST00000495680 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 PXYLP1Q8TE99 480 aa14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 DEFB118Q96PH6 123 aa14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
SHROOM1-206ENST00000495680 MAP4K4O95819 1239 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 UQCRFS1P1P0C7P4 283 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 POLA2Q14181 598 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 MAPKAPK5Q8IW41 473 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 PRO3102Q9H379 93 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 PAK6Q9NQU5 681 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 ALPK3Q96L96 1907 aa14.82□□□□□ -0.04
SHROOM1-206ENST00000495680 PLXNB2O15031 1838 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 FOCADQ5VW36 1801 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 USP17L5A8MUK1 530 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 TRIM32Q13049 653 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 NAA16Q6N069 864 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 COA7Q96BR5 231 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 PIH1D3Q9NQM4 214 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 TLR7Q9NYK1 1049 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 PNMA3Q9UL41 463 aa14.81□□□□□ -0.04
SHROOM1-206ENST00000495680 ZBTB7BO15156 539 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 MTMR2Q13614 643 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 SH3D19Q5HYK7 790 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 TTC39AQ5SRH9 613 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 DIS3LQ8TF46 1054 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 TGFBRAP1Q8WUH2 860 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 HTATIP2Q9BUP3 242 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 CRISPLD2Q9H0B8 497 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 PI4KBQ9UBF8 816 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 GJD2Q9UKL4 321 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 PALD1Q9ULE6 856 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 FLT1P17948 1338 aa14.8□□□□□ -0.04
SHROOM1-206ENST00000495680 SURF6O75683 361 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 GDF11O95390 407 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 RLBP1P12271 317 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 ZAP70P43403 619 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 PPP4CP60510 307 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 ATP8B2P98198 1209 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 ZKSCAN2Q63HK3 967 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 TXNRD2Q9NNW7 524 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 GPR108Q9NPR9 543 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 SAP30BPQ9UHR5 308 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 DBNLQ9UJU6 430 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
SHROOM1-206ENST00000495680 GCLCP48506 637 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 OS9Q13438 667 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 POTEEQ6S8J3 1075 aa14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 METTL16Q86W50 562 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 PAWRQ96IZ0 340 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 NOL10Q9BSC4 688 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms