RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.7■■□□□ 1.06
TMEM53-209ENST00000495630 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
TMEM53-209ENST00000495630 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
TMEM53-209ENST00000495630 GNAI3P08754 354 aa21.69■■□□□ 1.06
TMEM53-209ENST00000495630 NECAB2Q7Z6G3 386 aa21.69■■□□□ 1.06
TMEM53-209ENST00000495630 PAWRQ96IZ0 340 aaKnown RBP21.69■■□□□ 1.06
TMEM53-209ENST00000495630 HMG20BQ9P0W2 317 aa21.69■■□□□ 1.06
TMEM53-209ENST00000495630 MGAMO43451 1857 aa21.69■■□□□ 1.06
TMEM53-209ENST00000495630 SRGAP3O43295 1099 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 CAP2P40123 477 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 MTX1Q13505 466 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 ANKLE1Q8NAG6 615 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 SPATA5Q8NB90 893 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 NSUN4Q96CB9 384 aaKnown RBP21.68■■□□□ 1.06
TMEM53-209ENST00000495630 NEUROD6Q96NK8 337 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 GJD2Q9UKL4 321 aa21.68■■□□□ 1.06
TMEM53-209ENST00000495630 USP17L5A8MUK1 530 aa21.67■■□□□ 1.06
TMEM53-209ENST00000495630 SH3D19Q5HYK7 790 aa21.67■■□□□ 1.06
TMEM53-209ENST00000495630 ARHGAP45Q92619 1136 aa21.67■■□□□ 1.06
TMEM53-209ENST00000495630 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.67■■□□□ 1.06
TMEM53-209ENST00000495630 STAP2Q9UGK3 403 aa21.67■■□□□ 1.06
TMEM53-209ENST00000495630 FAM196BA6NMK8 535 aa21.66■■□□□ 1.06
TMEM53-209ENST00000495630 HMGCRP04035 888 aa21.66■■□□□ 1.06
TMEM53-209ENST00000495630 GORABQ5T7V8 394 aa21.66■■□□□ 1.06
TMEM53-209ENST00000495630 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
TMEM53-209ENST00000495630 HMX1Q9NP08 348 aaPredicted RBP21.66■■□□□ 1.06
TMEM53-209ENST00000495630 HERC5Q9UII4 1024 aaKnown RBP21.66■■□□□ 1.06
TMEM53-209ENST00000495630 DOCK2Q92608 1830 aa21.66■■□□□ 1.06
TMEM53-209ENST00000495630 RPTORQ8N122 1335 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 HMGCS2P54868 508 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 TBC1D9Q6ZT07 1266 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 AS3MTQ9HBK9 375 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 RAI14Q9P0K7 980 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 PI4KBQ9UBF8 816 aa21.65■■□□□ 1.06
TMEM53-209ENST00000495630 COL2A1P02458 1487 aaPredicted RBP21.64■■□□□ 1.06
TMEM53-209ENST00000495630 ARID4AP29374 1257 aaPredicted RBP21.64■■□□□ 1.05
TMEM53-209ENST00000495630 BMP8BP34820 402 aa21.64■■□□□ 1.05
TMEM53-209ENST00000495630 WDR18Q9BV38 432 aa21.64■■□□□ 1.05
TMEM53-209ENST00000495630 DHX36Q9H2U1 1008 aaKnown RBP21.64■■□□□ 1.05
TMEM53-209ENST00000495630 MORF4L1Q9UBU8 362 aa21.64■■□□□ 1.05
TMEM53-209ENST00000495630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.64■■□□□ 1.05
TMEM53-209ENST00000495630 RARSP54136 660 aaKnown RBP21.63■■□□□ 1.05
TMEM53-209ENST00000495630 RRP1BQ14684 758 aaKnown RBP21.63■■□□□ 1.05
TMEM53-209ENST00000495630 TEX11Q8IYF3 940 aa21.63■■□□□ 1.05
TMEM53-209ENST00000495630 LRP2BPQ9P2M1 347 aa21.63■■□□□ 1.05
TMEM53-209ENST00000495630 DOCK1Q14185 1865 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 PHIPQ8WWQ0 1821 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 UQCRFS1P1P0C7P4 283 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 HOXA7P31268 230 aaPredicted RBP21.62■■□□□ 1.05
TMEM53-209ENST00000495630 PI16Q6UXB8 463 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 SLC17A8Q8NDX2 589 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 DIS3LQ8TF46 1054 aaKnown RBP21.62■■□□□ 1.05
TMEM53-209ENST00000495630 GDF15Q99988 308 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 NBPF3Q9H094 633 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 PTPRFP10586 1907 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 DOCK3Q8IZD9 2030 aa21.62■■□□□ 1.05
TMEM53-209ENST00000495630 SOX1O00570 391 aaPredicted RBP21.61■■□□□ 1.05
TMEM53-209ENST00000495630 BAG3O95817 575 aa21.61■■□□□ 1.05
TMEM53-209ENST00000495630 BACE1P56817 501 aa21.61■■□□□ 1.05
TMEM53-209ENST00000495630 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.05
TMEM53-209ENST00000495630 FOXP4Q8IVH2 680 aaPredicted RBP21.61■■□□□ 1.05
TMEM53-209ENST00000495630 NOL10Q9BSC4 688 aaKnown RBP21.61■■□□□ 1.05
TMEM53-209ENST00000495630 C19orf81C9J6K1 198 aa21.6■■□□□ 1.05
TMEM53-209ENST00000495630 ASNSP08243 561 aa21.6■■□□□ 1.05
TMEM53-209ENST00000495630 XRCC5P13010 732 aaKnown RBP21.6■■□□□ 1.05
TMEM53-209ENST00000495630 PLCG2P16885 1265 aa21.6■■□□□ 1.05
TMEM53-209ENST00000495630 IRX3P78415 501 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-209ENST00000495630 SH3RF3Q8TEJ3 882 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-209ENST00000495630 P2RX7Q99572 595 aaKnown RBP21.6■■□□□ 1.05
TMEM53-209ENST00000495630 GINM1Q9NU53 330 aa21.6■■□□□ 1.05
TMEM53-209ENST00000495630 TMOD4Q9NZQ9 345 aa21.6■■□□□ 1.05
TMEM53-209ENST00000495630 MCAMP43121 646 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 PPP4CP60510 307 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 TRIM32Q13049 653 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 GPR153Q6NV75 609 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 METTL16Q86W50 562 aaKnown RBP21.59■■□□□ 1.05
TMEM53-209ENST00000495630 GPRC5AQ8NFJ5 357 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 LRCH3Q96II8 777 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 OGDHLQ9ULD0 1010 aa21.59■■□□□ 1.05
TMEM53-209ENST00000495630 IPO8O15397 1037 aaKnown RBP21.58■■□□□ 1.05
TMEM53-209ENST00000495630 GNAI2P04899 355 aa21.58■■□□□ 1.05
TMEM53-209ENST00000495630 MNX1P50219 401 aaPredicted RBP21.58■■□□□ 1.05
TMEM53-209ENST00000495630 TRMT44Q8IYL2 757 aaKnown RBP21.58■■□□□ 1.05
TMEM53-209ENST00000495630 C7orf61Q8IZ16 206 aa21.58■■□□□ 1.05
TMEM53-209ENST00000495630 NUDT12Q9BQG2 462 aa21.58■■□□□ 1.05
TMEM53-209ENST00000495630 C11orf49Q9H6J7 331 aa21.58■■□□□ 1.05
TMEM53-209ENST00000495630 DLL1O00548 723 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 IGSF3O75054 1194 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 CYP2B6P20813 491 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 MTMR2Q13614 643 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 MAP3K21Q5TCX8 1036 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 NAA16Q6N069 864 aaPredicted RBP21.57■■□□□ 1.04
TMEM53-209ENST00000495630 SOCS4Q8WXH5 440 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 TRIB2Q92519 343 aa21.57■■□□□ 1.04
TMEM53-209ENST00000495630 USP17L10C9JJH3 530 aa21.56■■□□□ 1.04
TMEM53-209ENST00000495630 MAPK4P31152 587 aa21.56■■□□□ 1.04
TMEM53-209ENST00000495630 TGFBRAP1Q8WUH2 860 aa21.56■■□□□ 1.04
TMEM53-209ENST00000495630 GPR108Q9NPR9 543 aa21.56■■□□□ 1.04
TMEM53-209ENST00000495630 AATFQ9NY61 560 aaKnown RBP eCLIP21.56■■□□□ 1.04
TMEM53-209ENST00000495630 RBPJLQ9UBG7 517 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms