RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TEX33O43247 280 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 N4BP1O75113 896 aaKnown RBP17.56■□□□□ 0.4
SDF4-207ENST00000494748 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
SDF4-207ENST00000494748 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
SDF4-207ENST00000494748 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 SLC9C2Q5TAH2 1124 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 IGDCC4Q8TDY8 1250 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 TIAM2Q8IVF5 1701 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 ACTN2P35609 894 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
SDF4-207ENST00000494748 MLKLQ8NB16 471 aa17.56■□□□□ 0.4
SDF4-207ENST00000494748 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
SDF4-207ENST00000494748 LMAN1P49257 510 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 CDC23Q9UJX2 597 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 FECHP22830 423 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 SERTAD1Q9UHV2 236 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 ABCC12Q96J65 1359 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 RPS6KA5O75582 802 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 ABL1P00519 1130 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 CCDC175P0C221 793 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
SDF4-207ENST00000494748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDF4-207ENST00000494748 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 PTPREP23469 700 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 AK7Q96M32 723 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 RASSF4Q9H2L5 321 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 LZTFL1Q9NQ48 299 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 PUF60Q9UHX1 559 aaKnown RBP17.54■□□□□ 0.4
SDF4-207ENST00000494748 PLEKHG2Q9H7P9 1386 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 FOXR1Q6PIV2 292 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 RASGRP2Q7LDG7 609 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 TACC3Q9Y6A5 838 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 DOCK2Q92608 1830 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 AKR1B15C9JRZ8 316 aaPredicted RBP17.54■□□□□ 0.4
SDF4-207ENST00000494748 RBL2Q08999 1139 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 NUTM2AQ8IVF1 878 aaPredicted RBP17.54■□□□□ 0.4
SDF4-207ENST00000494748 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 ABCB6Q9NP58 842 aa17.54■□□□□ 0.4
SDF4-207ENST00000494748 POLR2DO15514 142 aaKnown RBP17.53■□□□□ 0.4
SDF4-207ENST00000494748 CDKL5O76039 1030 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 PLCD1P51178 756 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 RRP15Q9Y3B9 282 aaKnown RBP17.53■□□□□ 0.4
SDF4-207ENST00000494748 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 STK36Q9NRP7 1315 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 NID2Q14112 1375 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 NOP2P46087 812 aaKnown RBP17.53■□□□□ 0.4
SDF4-207ENST00000494748 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
SDF4-207ENST00000494748 USP49Q70CQ1 688 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 SGMS1Q86VZ5 419 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 MICU3Q86XE3 530 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 VPS18Q9P253 973 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
SDF4-207ENST00000494748 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
SDF4-207ENST00000494748 VSNL1P62760 191 aa17.52■□□□□ 0.39
SDF4-207ENST00000494748 CUL4BQ13620 913 aa17.52■□□□□ 0.39
SDF4-207ENST00000494748 CDKAL1Q5VV42 579 aa17.52■□□□□ 0.39
SDF4-207ENST00000494748 HDXQ7Z353 690 aa17.52■□□□□ 0.39
SDF4-207ENST00000494748 C10orf67Q8IYJ2 551 aa17.52■□□□□ 0.39
SDF4-207ENST00000494748 ADD3Q9UEY8 706 aaKnown RBP17.52■□□□□ 0.39
SDF4-207ENST00000494748 BTBD18B2RXH4 712 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 B4E1Z4 1266 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 ADD2P35612 726 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 MCAMP43121 646 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 INCENPQ9NQS7 918 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 RSPH14Q9UHP6 348 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
SDF4-207ENST00000494748 MCM6Q14566 821 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 CEP112Q8N8E3 955 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 FAN1Q9Y2M0 1017 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 A0A087X0B3 334 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 MFAP3LO75121 409 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 MMP1P03956 469 aa17.51■□□□□ 0.39
SDF4-207ENST00000494748 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
SDF4-207ENST00000494748 ERCC5P28715 1186 aaPredicted RBP17.51■□□□□ 0.39
SDF4-207ENST00000494748 NAA15Q9BXJ9 866 aaKnown RBP17.51■□□□□ 0.39
SDF4-207ENST00000494748 BCORQ6W2J9 1755 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 FMNL1O95466 1100 aaPredicted RBP17.5■□□□□ 0.39
SDF4-207ENST00000494748 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
SDF4-207ENST00000494748 AKAP2Q9Y2D5 859 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 ZBTB43O43298 467 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 ARHGAP25P42331 645 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 ZBTB9Q96C00 473 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 GYPCP04921 128 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 CWC15Q9P013 229 aaKnown RBP17.5■□□□□ 0.39
SDF4-207ENST00000494748 TAOK2Q9UL54 1235 aa17.5■□□□□ 0.39
SDF4-207ENST00000494748 MYH3P11055 1940 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms