RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 METP08581 1390 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
LINC00488-201ENST00000494582 GYPCP04921 128 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
LINC00488-201ENST00000494582 TUBB4BP68371 445 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 GRIN1Q05586 938 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 PDCLQ13371 301 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 NEDD9Q14511 834 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 NAIF1Q69YI7 327 aaPredicted RBP11.49□□□□□ -0.57
LINC00488-201ENST00000494582 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
LINC00488-201ENST00000494582 MAP3K14Q99558 947 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 CCDC9Q9Y3X0 531 aaKnown RBP11.49□□□□□ -0.57
LINC00488-201ENST00000494582 ACEP12821 1306 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 CEMIPQ8WUJ3 1361 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 PPP1R12AO14974 1030 aaPredicted RBP11.48□□□□□ -0.57
LINC00488-201ENST00000494582 ATP5JP18859 108 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 TRDNQ13061 729 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 KIRREL3Q8IZU9 778 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 REXO2Q9Y3B8 237 aaKnown RBP11.48□□□□□ -0.57
LINC00488-201ENST00000494582 MYH8P13535 1937 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
LINC00488-201ENST00000494582 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
LINC00488-201ENST00000494582 TUBBP07437 444 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 TTMPQ5BVD1 217 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
LINC00488-201ENST00000494582 CAPZA3Q96KX2 299 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 CRACR2AQ9BSW2 395 aa11.48□□□□□ -0.57
LINC00488-201ENST00000494582 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 H0YHG0 523 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 CHUKO15111 745 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 AMPHP49418 695 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 FRMD3A2A2Y4 597 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 COBLO75128 1261 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 NEBLO76041 1014 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 RAPGEF3O95398 923 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 FECHP22830 423 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 MRPS25P82663 173 aaKnown RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 MORC3Q14149 939 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 WLSQ5T9L3 541 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 FAM228AQ86W67 206 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 DBNDD2Q9BQY9 259 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 NAA15Q9BXJ9 866 aaKnown RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 HOOK1Q9UJC3 728 aaKnown RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
LINC00488-201ENST00000494582 MRC1P22897 1456 aa11.47□□□□□ -0.57
LINC00488-201ENST00000494582 PRAMEF22A3QJZ6 481 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 GRM8O00222 908 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 ZNF185O15231 689 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 PDHBP11177 359 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 SARSP49591 514 aaKnown RBP11.46□□□□□ -0.57
LINC00488-201ENST00000494582 STX17P56962 302 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 OTUD6BQ8N6M0 293 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 AENQ8WTP8 325 aaKnown RBP11.46□□□□□ -0.57
LINC00488-201ENST00000494582 VEZTQ9HBM0 779 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 KLC4Q9NSK0 619 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 BCCIPQ9P287 314 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00488-201ENST00000494582 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
LINC00488-201ENST00000494582 ODF2LQ9ULJ1 636 aa11.46□□□□□ -0.57
LINC00488-201ENST00000494582 NWD1Q149M9 1564 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 FLT4P35916 1363 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 UBE2Q2LH0YL09 131 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 NDUFAB1O14561 156 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 PPP6R2O75170 966 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 RASSF9O75901 435 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.58
LINC00488-201ENST00000494582 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.58
LINC00488-201ENST00000494582 TFCP2Q12800 502 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 POSTNQ15063 836 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 VPS37DQ86XT2 251 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 TSEN2Q8NCE0 465 aaKnown RBP11.46□□□□□ -0.58
LINC00488-201ENST00000494582 HDAC7Q8WUI4 952 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.58
LINC00488-201ENST00000494582 GUCA1BQ9UMX6 200 aa11.46□□□□□ -0.58
LINC00488-201ENST00000494582 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 IRF6O14896 467 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 RTN2O75298 545 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
LINC00488-201ENST00000494582 SETQ01105 290 aaPredicted RBP11.45□□□□□ -0.58
LINC00488-201ENST00000494582 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms