RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 LRRFIP2Q9Y608 721 aaKnown RBP8.65□□□□□ -1.02
FN1-225ENST00000494446 REV3LO60673 3130 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 GBF1Q92538 1859 aa8.65□□□□□ -1.02
FN1-225ENST00000494446 NFIAQ12857 509 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
FN1-225ENST00000494446 CDC42EP5Q6NZY7 148 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 LMBR1LQ6UX01 489 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 G2E3Q7L622 706 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 ZFPM1Q8IX07 1006 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
FN1-225ENST00000494446 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
FN1-225ENST00000494446 NECAB3Q96P71 396 aaPredicted RBP8.64□□□□□ -1.03
FN1-225ENST00000494446 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
FN1-225ENST00000494446 LRFN3Q9BTN0 628 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 CHMP4AQ9BY43 222 aa8.64□□□□□ -1.03
FN1-225ENST00000494446 ZNF853P0CG23 659 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 XRCC5P13010 732 aaKnown RBP8.63□□□□□ -1.03
FN1-225ENST00000494446 DNAJB2P25686 324 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 CCL14Q16627 93 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 CAVIN4Q5BKX8 364 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 ZSCAN29Q8IWY8 852 aaPredicted RBP8.63□□□□□ -1.03
FN1-225ENST00000494446 RUNDC1Q96C34 613 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 ZNF576Q9H609 170 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 CHD9Q3L8U1 2897 aa8.63□□□□□ -1.03
FN1-225ENST00000494446 PEX10O60683 326 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 CNGA1P29973 690 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 GNAI1P63096 354 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 PABPC4Q13310 644 aaKnown RBP eCLIP8.62□□□□□ -1.03
FN1-225ENST00000494446 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
FN1-225ENST00000494446 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 PUS3Q9BZE2 481 aaKnown RBP8.62□□□□□ -1.03
FN1-225ENST00000494446 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
FN1-225ENST00000494446 USP40Q9NVE5 1235 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 SUGT1Q9Y2Z0 365 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 SMCHD1A6NHR9 2005 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 CACNA1AO00555 2505 aa8.62□□□□□ -1.03
FN1-225ENST00000494446 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.61□□□□□ -1.03
FN1-225ENST00000494446 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.61□□□□□ -1.03
FN1-225ENST00000494446 CTNND1O60716 968 aaKnown RBP8.61□□□□□ -1.03
FN1-225ENST00000494446 RGS2P41220 211 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 HMGCS2P54868 508 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 SPP2Q13103 211 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 AKNAD1Q5T1N1 836 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 GJC2Q5T442 439 aaPredicted RBP8.61□□□□□ -1.03
FN1-225ENST00000494446 SLC39A5Q6ZMH5 540 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
FN1-225ENST00000494446 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 LINS1Q8NG48 757 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 DNAAF4Q8WXU2 420 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 PRDM12Q9H4Q4 367 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 EPHX3Q9H6B9 360 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 MORF4L1Q9UBU8 362 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
FN1-225ENST00000494446 TRIM43BA6NCK2 446 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 DNM1LO00429 736 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 IGFBP4P22692 258 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 RGS3P49796 1198 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 EPHB4P54760 987 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 IRX3P78415 501 aaPredicted RBP8.6□□□□□ -1.03
FN1-225ENST00000494446 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 TMEM31Q5JXX7 168 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 GPRC5AQ8NFJ5 357 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
FN1-225ENST00000494446 TRIM43Q96BQ3 446 aaPredicted RBP8.6□□□□□ -1.03
FN1-225ENST00000494446 TIFAQ96CG3 184 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
FN1-225ENST00000494446 PDLIM7Q9NR12 457 aa8.6□□□□□ -1.03
FN1-225ENST00000494446 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
FN1-225ENST00000494446 MROH5Q6ZUA9 1318 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 ZNFX1Q9P2E3 1918 aaKnown RBP8.59□□□□□ -1.03
FN1-225ENST00000494446 MAPK4P31152 587 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
FN1-225ENST00000494446 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 CCDC129Q6ZRS4 1044 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 LPAR1Q92633 364 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 USP6NLQ92738 828 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 P2RX7Q99572 595 aaKnown RBP8.59□□□□□ -1.03
FN1-225ENST00000494446 APBA2Q99767 749 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
FN1-225ENST00000494446 TXNRD2Q9NNW7 524 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 TRANK1O15050 2925 aa8.59□□□□□ -1.03
FN1-225ENST00000494446 DDTLA6NHG4 134 aaPredicted RBP8.58□□□□□ -1.04
FN1-225ENST00000494446 FAM196BA6NMK8 535 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms