RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 ZKSCAN2Q63HK3 967 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 LHFPL2Q6ZUX7 228 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 ZNF784Q8NCA9 323 aaPredicted RBP8.34□□□□□ -1.07
SNX13-210ENST00000494402 NGDNQ8NEJ9 315 aaKnown RBP8.34□□□□□ -1.07
SNX13-210ENST00000494402 USP33Q8TEY7 942 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 SLC7A3Q8WY07 619 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
SNX13-210ENST00000494402 GJA10Q969M2 543 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 ERP27Q96DN0 273 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 CSRNP2Q9H175 543 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 EPN3Q9H201 632 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 CHRDQ9H2X0 955 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 C9orf78Q9NZ63 289 aaPredicted RBP8.34□□□□□ -1.07
SNX13-210ENST00000494402 IP6K2Q9UHH9 426 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 GABRDO14764 452 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 NPTXRO95502 500 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 IL2RAP01589 272 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 TYRP1P17643 537 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 CHAF1AQ13111 956 aaPredicted RBP8.33□□□□□ -1.08
SNX13-210ENST00000494402 TTLL5Q6EMB2 1281 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 CC2D1AQ6P1N0 951 aaPredicted RBP8.33□□□□□ -1.08
SNX13-210ENST00000494402 BNC2Q6ZN30 1099 aaPredicted RBP8.33□□□□□ -1.08
SNX13-210ENST00000494402 ATXN2LQ8WWM7 1075 aaKnown RBP8.33□□□□□ -1.08
SNX13-210ENST00000494402 ESYT1Q9BSJ8 1104 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
SNX13-210ENST00000494402 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 RCAN3Q9UKA8 241 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 FRMD4BQ9Y2L6 1034 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 IPPQ9Y573 584 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
SNX13-210ENST00000494402 A0A1W2PP55 124 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 A0A1W2PQH9 124 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 NBNO60934 754 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 FBXO21O94952 628 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 LMNB1P20700 586 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 VEGFBP49765 207 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 KCNC4Q03721 635 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 GBX1Q14549 363 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 NCAPHQ15003 741 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 TRIP4Q15650 581 aaPredicted RBP8.32□□□□□ -1.08
SNX13-210ENST00000494402 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 C1orf228Q6PIY5 440 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 CNTD1Q8N815 330 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
SNX13-210ENST00000494402 CNKSR1Q969H4 720 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 TTC17Q96AE7 1141 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
SNX13-210ENST00000494402 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 BRMS1Q9HCU9 246 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 CLIC5Q9NZA1 410 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 EVLQ9UI08 416 aaPredicted RBP8.32□□□□□ -1.08
SNX13-210ENST00000494402 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
SNX13-210ENST00000494402 MORC2Q9Y6X9 1032 aaPredicted RBP8.32□□□□□ -1.08
SNX13-210ENST00000494402 APAF1O14727 1248 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 PGRP06401 933 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 L1CAMP32004 1257 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 IDH3AP50213 366 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 ARSDP51689 593 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 SH3BP2P78314 561 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 CLCQ05315 142 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 STK3Q13188 491 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 CCDC96Q2M329 555 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 CCDC184Q52MB2 194 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 IER5Q5VY09 327 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 ZNF295-AS1Q8N0V1 137 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
SNX13-210ENST00000494402 TRIM8Q9BZR9 551 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 ABCB6Q9NP58 842 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 HDAC9Q9UKV0 1011 aa8.31□□□□□ -1.08
SNX13-210ENST00000494402 LUC7L2Q9Y383 392 aaKnown RBP8.31□□□□□ -1.08
SNX13-210ENST00000494402 TNKSO95271 1327 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 LILRA1O75019 489 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 HIP1RO75146 1068 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 EDN3P14138 238 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 SDSP20132 328 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 GJA9P57773 515 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 SLC10A6Q3KNW5 377 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 IFFO2Q5TF58 517 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 CREBRFQ8IUR6 639 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
SNX13-210ENST00000494402 CMTR1Q8N1G2 835 aaKnown RBP8.3□□□□□ -1.08
SNX13-210ENST00000494402 EXOC2Q96KP1 924 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 CDC6Q99741 560 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 NLRC4Q9NPP4 1024 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 PNMA8BQ9ULN7 279 aaPredicted RBP8.3□□□□□ -1.08
SNX13-210ENST00000494402 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
SNX13-210ENST00000494402 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
SNX13-210ENST00000494402 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms