RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 PRPF40BQ6NWY9 871 aaKnown RBP10.48□□□□□ -0.73
RIF1-211ENST00000494333 COPS6Q7L5N1 327 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 ZNF34Q8IZ26 560 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 NYXQ9GZU5 481 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 SCN7AQ01118 1682 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 KDM3BQ7LBC6 1761 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
RIF1-211ENST00000494333 TERTO14746 1132 aaKnown RBP10.47□□□□□ -0.73
RIF1-211ENST00000494333 ANP32CO43423 234 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 TOMM70O94826 608 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 ALDH1B1P30837 517 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 PDE4CQ08493 712 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 XAGE3Q8WTP9 111 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 PHACTR1Q9C0D0 580 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 RUBCNLQ9H714 662 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 RRAGCQ9HB90 399 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
RIF1-211ENST00000494333 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 UBN2Q6ZU65 1347 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
RIF1-211ENST00000494333 ZNF853P0CG23 659 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
RIF1-211ENST00000494333 DBN1Q16643 649 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 SOGA3Q5TF21 947 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 DUSP27Q5VZP5 1158 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 PHLDB3Q6NSJ2 640 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 ALDH16A1Q8IZ83 802 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 VTI1AQ96AJ9 217 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 MKNK1Q9BUB5 465 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 CHPF2Q9P2E5 772 aa10.46□□□□□ -0.73
RIF1-211ENST00000494333 GLTPD2A6NH11 291 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 H3BM21 787 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
RIF1-211ENST00000494333 HOXB7P09629 217 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 GNAI1P63096 354 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 ARSJQ5FYB0 599 aaPredicted RBP10.45□□□□□ -0.74
RIF1-211ENST00000494333 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 CAPN12Q6ZSI9 719 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 TRIM22Q8IYM9 498 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 C16orf71Q8IYS4 520 aaPredicted RBP10.45□□□□□ -0.74
RIF1-211ENST00000494333 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 TAOK3Q9H2K8 898 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
RIF1-211ENST00000494333 DBF4Q9UBU7 674 aaPredicted RBP10.45□□□□□ -0.74
RIF1-211ENST00000494333 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 NTSR2O95665 410 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 HSPA6P17066 643 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 SCNN1AP37088 669 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 TCIRG1Q13488 830 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 CRY2Q49AN0 593 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 CCDC93Q567U6 631 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 HSP90AB3PQ58FF7 597 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 OLFM4Q6UX06 510 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
RIF1-211ENST00000494333 ZNF775Q96BV0 537 aaPredicted RBP10.44□□□□□ -0.74
RIF1-211ENST00000494333 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 UTP14AQ9BVJ6 771 aaKnown RBP10.44□□□□□ -0.74
RIF1-211ENST00000494333 BCORQ6W2J9 1755 aa10.44□□□□□ -0.74
RIF1-211ENST00000494333 ABCC12Q96J65 1359 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 ANKRD31Q8N7Z5 1873 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 LTBP3Q9NS15 1303 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 A0A1W2PNR3 127 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 H7C1W4 665 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 THBS1P07996 1170 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 NANOS1Q8WY41 292 aaKnown RBP10.43□□□□□ -0.74
RIF1-211ENST00000494333 KLRG1Q96E93 195 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
RIF1-211ENST00000494333 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
RIF1-211ENST00000494333 HYPKQ9NX55 129 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
RIF1-211ENST00000494333 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
RIF1-211ENST00000494333 VEGFAP15692 232 aaPredicted RBP10.42□□□□□ -0.74
RIF1-211ENST00000494333 HOXA10P31260 410 aaPredicted RBP10.42□□□□□ -0.74
RIF1-211ENST00000494333 SLC10A5Q5PT55 438 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 NLRP10Q86W26 655 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 RTKN2Q8IZC4 609 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 C8orf58Q8NAV2 365 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 RHPN1Q8TCX5 695 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 COL26A1Q96A83 441 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
RIF1-211ENST00000494333 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
RIF1-211ENST00000494333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
RIF1-211ENST00000494333 TRMT112Q9UI30 125 aaKnown RBP10.42□□□□□ -0.74
RIF1-211ENST00000494333 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
RIF1-211ENST00000494333 CDC14CA4D256 554 aa10.41□□□□□ -0.74
RIF1-211ENST00000494333 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
RIF1-211ENST00000494333 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
RIF1-211ENST00000494333 RTN1Q16799 776 aa10.41□□□□□ -0.74
RIF1-211ENST00000494333 SYNE4Q8N205 404 aa10.41□□□□□ -0.74
RIF1-211ENST00000494333 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms