RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LINC00114Q6XXX2 140 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 DDX54Q8TDD1 881 aaKnown RBP7.27□□□□□ -1.25
PTCD3-219ENST00000494323 MRRFQ96E11 262 aaKnown RBP7.27□□□□□ -1.25
PTCD3-219ENST00000494323 LTV1Q96GA3 475 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-219ENST00000494323 MTFR1LQ9H019 292 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 ABI2Q9NYB9 513 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-219ENST00000494323 QRICH2Q9H0J4 1663 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 LRRC37A3O60309 1634 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 TTC21AQ8NDW8 1320 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 PIK3C2AO00443 1686 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ROCK2O75116 1388 aaKnown RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ELOA3CA0A087WX78 387 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ELOA3DA6NLF2 546 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 SIN3BO75182 1162 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 TNFRSF21O75509 655 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 SASH3O75995 380 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 P4HBP07237 508 aaKnown RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ALAS2P22557 587 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 FBLN1P23142 703 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ELOA3BQ3SY89 546 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 TTC39BQ5VTQ0 682 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ELOA3Q8NG57 546 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 ANKRD24Q8TF21 1146 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
PTCD3-219ENST00000494323 NOP53Q9NZM5 478 aaKnown RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-219ENST00000494323 CCDC7Q96M83 1385 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 MSTNO14793 375 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 PHACTR2O75167 634 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 MAP3K6O95382 1288 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 RARAP10276 462 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 NFKB1P19838 968 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 MAPK8P45983 427 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 GPR162Q16538 588 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 ZNF827Q17R98 1081 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 PMEPA1Q969W9 287 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 SYTL4Q96C24 671 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-219ENST00000494323 CSRNP1Q96S65 589 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 SUV39H2Q9H5I1 410 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 TMEM63CQ9P1W3 806 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 UTRNP46939 3433 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 AKAP12Q02952 1782 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 CASZ1Q86V15 1759 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 BCL9O00512 1426 aa7.25□□□□□ -1.25
PTCD3-219ENST00000494323 CPNE3O75131 537 aaKnown RBP7.24□□□□□ -1.25
PTCD3-219ENST00000494323 TARSP26639 723 aaKnown RBP7.24□□□□□ -1.25
PTCD3-219ENST00000494323 COL8A1P27658 744 aa7.24□□□□□ -1.25
PTCD3-219ENST00000494323 ENOX2Q16206 610 aaKnown RBP7.24□□□□□ -1.25
PTCD3-219ENST00000494323 KRT25Q7Z3Z0 450 aa7.24□□□□□ -1.25
PTCD3-219ENST00000494323 RAB44Q7Z6P3 723 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-219ENST00000494323 BHMTQ93088 406 aa7.24□□□□□ -1.25
PTCD3-219ENST00000494323 CARD11Q9BXL7 1154 aa7.24□□□□□ -1.25
PTCD3-219ENST00000494323 MYOM1P52179 1685 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 PNMA6FA0A0J9YX94 578 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
PTCD3-219ENST00000494323 VAMP1P23763 118 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 ORC1Q13415 861 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 HDGFL2Q7Z4V5 671 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-219ENST00000494323 TNFRSF25Q93038 417 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 SPOCK3Q9BQ16 436 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 ZFYVE28Q9HCC9 887 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 TLR7Q9NYK1 1049 aaKnown RBP7.23□□□□□ -1.25
PTCD3-219ENST00000494323 TFCP2L1Q9NZI6 479 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 ZFATQ9P243 1243 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 FOXD3Q9UJU5 478 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-219ENST00000494323 RGPD3A6NKT7 1758 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-219ENST00000494323 RGPD4Q7Z3J3 1758 aa7.23□□□□□ -1.25
PTCD3-219ENST00000494323 NFAT5O94916 1531 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 USP31Q70CQ4 1352 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 SBNO2Q9Y2G9 1366 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 KRBA1A5PL33 1030 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 MMP20O60882 483 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 PRPF40AO75400 957 aaKnown RBP7.22□□□□□ -1.25
PTCD3-219ENST00000494323 LDHBP07195 334 aaKnown RBP7.22□□□□□ -1.25
PTCD3-219ENST00000494323 PSAPP07602 524 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 HOXD8P13378 290 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-219ENST00000494323 SOX18P35713 384 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 C1QTNF8P60827 252 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 ALG1LQ6GMV1 187 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 OR13H1Q8NG92 308 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 FBF1Q8TES7 1133 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 IP6K1Q92551 441 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 BCL11AQ9H165 835 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 TERF2IPQ9NYB0 399 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 CNTN3Q9P232 1028 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 CHD4Q14839 1912 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 WNK3Q9BYP7 1800 aa7.22□□□□□ -1.25
PTCD3-219ENST00000494323 TRPM1Q7Z4N2 1603 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 ITGB2P05107 769 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 CES1P23141 567 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 POLD1P28340 1107 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 ADH7P40394 386 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 AMPHP49418 695 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 PLAURQ03405 335 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 PCSK7Q16549 785 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 C1orf127Q8N9H9 656 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 NLGN2Q8NFZ4 835 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms