RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 FAM196BA6NMK8 535 aa27.41■■□□□ 1.98
SNIP1-203ENST00000493916 PTPRAP18433 802 aa27.41■■□□□ 1.98
SNIP1-203ENST00000493916 ADD2P35612 726 aa27.4■■□□□ 1.98
SNIP1-203ENST00000493916 USP5P45974 858 aa27.4■■□□□ 1.98
SNIP1-203ENST00000493916 CRHR2Q13324 411 aa27.4■■□□□ 1.98
SNIP1-203ENST00000493916 GCC1Q96CN9 775 aa27.4■■□□□ 1.98
SNIP1-203ENST00000493916 DDX60LQ5H9U9 1706 aaKnown RBP27.4■■□□□ 1.98
SNIP1-203ENST00000493916 CXCL11O14625 94 aa27.39■■□□□ 1.98
SNIP1-203ENST00000493916 FAM43AQ8N2R8 423 aa27.39■■□□□ 1.98
SNIP1-203ENST00000493916 PALD1Q9ULE6 856 aa27.39■■□□□ 1.98
SNIP1-203ENST00000493916 TTC41PQ6P2S7 1318 aa27.39■■□□□ 1.97
SNIP1-203ENST00000493916 FKTNO75072 461 aa27.38■■□□□ 1.97
SNIP1-203ENST00000493916 HLA-DOAP06340 250 aa27.38■■□□□ 1.97
SNIP1-203ENST00000493916 DGKZQ13574 1117 aa27.38■■□□□ 1.97
SNIP1-203ENST00000493916 FOXP4Q8IVH2 680 aaPredicted RBP27.38■■□□□ 1.97
SNIP1-203ENST00000493916 MCOLN1Q9GZU1 580 aa27.38■■□□□ 1.97
SNIP1-203ENST00000493916 SAP30BPQ9UHR5 308 aaKnown RBP27.38■■□□□ 1.97
SNIP1-203ENST00000493916 BTBD19C9JJ37 291 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 TSHZ3Q63HK5 1081 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 CTU1Q7Z7A3 348 aaKnown RBP27.37■■□□□ 1.97
SNIP1-203ENST00000493916 CRNKL1Q9BZJ0 848 aaKnown RBP27.37■■□□□ 1.97
SNIP1-203ENST00000493916 DNAJC18Q9H819 358 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 AFG3L2Q9Y4W6 797 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 SUPT16HQ9Y5B9 1047 aaKnown RBP27.37■■□□□ 1.97
SNIP1-203ENST00000493916 ZHX2Q9Y6X8 837 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 MYH7P12883 1935 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 PHIPQ8WWQ0 1821 aa27.37■■□□□ 1.97
SNIP1-203ENST00000493916 CAP2P40123 477 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 MOGSQ13724 837 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 UBE3CQ15386 1083 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 TAF1CQ15572 869 aaPredicted RBP27.36■■□□□ 1.97
SNIP1-203ENST00000493916 ZSCAN25Q6NSZ9 544 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 EXOC6Q8TAG9 804 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 ABHD8Q96I13 439 aa27.36■■□□□ 1.97
SNIP1-203ENST00000493916 MYH1P12882 1939 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 ATAD5Q96QE3 1844 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 ANKRD23Q86SG2 305 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 CRACR2BQ8N4Y2 399 aaPredicted RBP27.35■■□□□ 1.97
SNIP1-203ENST00000493916 EHD4Q9H223 541 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 ZFYVE28Q9HCC9 887 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 NAV1Q8NEY1 1877 aa27.35■■□□□ 1.97
SNIP1-203ENST00000493916 A0A0G2JLL6 359 aaPredicted RBP27.34■■□□□ 1.97
SNIP1-203ENST00000493916 RRP1BQ14684 758 aaKnown RBP27.34■■□□□ 1.97
SNIP1-203ENST00000493916 PRRT2Q7Z6L0 340 aaPredicted RBP27.34■■□□□ 1.97
SNIP1-203ENST00000493916 LCORLQ8N3X6 602 aa27.34■■□□□ 1.97
SNIP1-203ENST00000493916 TRIM34Q9BYJ4 488 aa27.34■■□□□ 1.97
SNIP1-203ENST00000493916 TBC1D2Q9BYX2 928 aa27.34■■□□□ 1.97
SNIP1-203ENST00000493916 SALL3Q9BXA9 1300 aa27.34■■□□□ 1.97
SNIP1-203ENST00000493916 ERC2O15083 957 aa27.33■■□□□ 1.97
SNIP1-203ENST00000493916 KBTBD3Q8NAB2 608 aa27.33■■□□□ 1.97
SNIP1-203ENST00000493916 PI4K2BQ8TCG2 481 aa27.33■■□□□ 1.97
SNIP1-203ENST00000493916 OTUD7AQ8TE49 926 aaPredicted RBP27.33■■□□□ 1.97
SNIP1-203ENST00000493916 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.33■■□□□ 1.97
SNIP1-203ENST00000493916 ZBTB47Q9UFB7 747 aaPredicted RBP27.33■■□□□ 1.97
SNIP1-203ENST00000493916 MBD4O95243 580 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 MX1P20591 662 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 SLFNL1Q499Z3 407 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 ANKRD45Q5TZF3 282 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 TTC6Q86TZ1 520 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 RWDD1Q9H446 243 aaPredicted RBP27.32■■□□□ 1.96
SNIP1-203ENST00000493916 GINM1Q9NU53 330 aa27.32■■□□□ 1.96
SNIP1-203ENST00000493916 GLRX3O76003 335 aaKnown RBP27.31■■□□□ 1.96
SNIP1-203ENST00000493916 CHGBP05060 677 aa27.31■■□□□ 1.96
SNIP1-203ENST00000493916 FASTKD5Q7L8L6 764 aaKnown RBP27.31■■□□□ 1.96
SNIP1-203ENST00000493916 ARMT1Q9H993 441 aa27.31■■□□□ 1.96
SNIP1-203ENST00000493916 SERPINB13Q9UIV8 391 aa27.31■■□□□ 1.96
SNIP1-203ENST00000493916 PTPRFP10586 1907 aa27.3■■□□□ 1.96
SNIP1-203ENST00000493916 PKN2Q16513 984 aaKnown RBP27.3■■□□□ 1.96
SNIP1-203ENST00000493916 SLC4A8Q2Y0W8 1093 aa27.3■■□□□ 1.96
SNIP1-203ENST00000493916 DCP1AQ9NPI6 582 aaPredicted RBP27.3■■□□□ 1.96
SNIP1-203ENST00000493916 TRIM75PA6NK02 468 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 PDHXO00330 501 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 TLR2O60603 784 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 ASNSP08243 561 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 GPAT2Q6NUI2 795 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 CCDC84Q86UT8 332 aaPredicted RBP27.29■■□□□ 1.96
SNIP1-203ENST00000493916 SMC5Q8IY18 1101 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 SDR42E1Q8WUS8 393 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 ERO1AQ96HE7 468 aa27.29■■□□□ 1.96
SNIP1-203ENST00000493916 USP17L5A8MUK1 530 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 CAPN15O75808 1086 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 SP3Q02447 781 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 TATDN1Q6P1N9 297 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 ZNF280CQ8ND82 737 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 ATP8A2Q9NTI2 1148 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 MCM9Q9NXL9 1143 aa27.28■■□□□ 1.96
SNIP1-203ENST00000493916 POLR3DP05423 398 aaPredicted RBP27.27■■□□□ 1.96
SNIP1-203ENST00000493916 ZFYP08048 801 aaPredicted RBP27.27■■□□□ 1.96
SNIP1-203ENST00000493916 PLCD1P51178 756 aa27.27■■□□□ 1.96
SNIP1-203ENST00000493916 PUS7LQ9H0K6 701 aaKnown RBP27.27■■□□□ 1.96
SNIP1-203ENST00000493916 AS3MTQ9HBK9 375 aa27.27■■□□□ 1.96
SNIP1-203ENST00000493916 SLC45A1Q9Y2W3 748 aa27.27■■□□□ 1.96
SNIP1-203ENST00000493916 LOC285556D6RIA3 1793 aa27.27■■□□□ 1.96
SNIP1-203ENST00000493916 ADGRA2Q96PE1 1338 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 JAG1P78504 1218 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 WDR18Q9BV38 432 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 STAP2Q9UGK3 403 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 TAOK2Q9UL54 1235 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 ZBTB21Q9ULJ3 1066 aa27.26■■□□□ 1.95
SNIP1-203ENST00000493916 RNF113AO15541 343 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms