RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 DEXIO95424 95 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 ZSCAN30Q86W11 494 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 PHKBQ93100 1093 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 SLC26A6Q9BXS9 759 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 FTOQ9C0B1 505 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 GGA1Q9UJY5 639 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 KIF28PB7ZC32 967 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 USP17L12C9JPN9 530 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 USP17L21D6R901 530 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 SPTLC2O15270 562 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 PPP4CP60510 307 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 GPSM2P81274 684 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 ANO1Q5XXA6 986 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 ENGASEQ8NFI3 743 aa12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.4
PHACTR4-204ENST00000493669 PLSCR1O15162 318 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 DDAH1O94760 285 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 BAG3O95817 575 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 IL1R1P14778 569 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 DDR1Q08345 913 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 AEBP2Q6ZN18 517 aaPredicted RBP12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 CRACR2BQ8N4Y2 399 aaPredicted RBP12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.41
PHACTR4-204ENST00000493669 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 PDE4BQ07343 736 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 CAMK4Q16566 473 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 CATIPQ7Z7H3 387 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 NBPF11Q86T75 865 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 MRVI1Q9Y6F6 885 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 UFL1O94874 794 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 NOL10Q9BSC4 688 aaKnown RBP12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
PHACTR4-204ENST00000493669 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 PPP6R2O75170 966 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 PROM2Q8N271 834 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 MMP1P03956 469 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 TBC1D22AQ8WUA7 517 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
PHACTR4-204ENST00000493669 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 XBP1P17861 261 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 USP25Q9UHP3 1055 aa12.49□□□□□ -0.41
PHACTR4-204ENST00000493669 PLCG2P16885 1265 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 CMA1P23946 247 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 NOSTRINQ8IVI9 506 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 PRPF3O43395 683 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 MSNP26038 577 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 USP5P45974 858 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 TROAPQ12815 778 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 MCM9Q9NXL9 1143 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
PHACTR4-204ENST00000493669 STX1AQ16623 288 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms