RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 EVI5O60447 810 aa26.55■■□□□ 1.84
PFDN4-205ENST00000493356 CRISPLD2Q9H0B8 497 aa26.55■■□□□ 1.84
PFDN4-205ENST00000493356 OSBPL5Q9H0X9 879 aaPredicted RBP26.55■■□□□ 1.84
PFDN4-205ENST00000493356 ALPK3Q96L96 1907 aa26.55■■□□□ 1.84
PFDN4-205ENST00000493356 COL2A1P02458 1487 aaPredicted RBP26.55■■□□□ 1.84
PFDN4-205ENST00000493356 SRGAP3O43295 1099 aa26.54■■□□□ 1.84
PFDN4-205ENST00000493356 SPP2Q13103 211 aa26.54■■□□□ 1.84
PFDN4-205ENST00000493356 HMG20BQ9P0W2 317 aa26.54■■□□□ 1.84
PFDN4-205ENST00000493356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.54■■□□□ 1.84
PFDN4-205ENST00000493356 LAMA3Q16787 3333 aa26.54■■□□□ 1.84
PFDN4-205ENST00000493356 A0A1W2PPC1 479 aa26.52■■□□□ 1.84
PFDN4-205ENST00000493356 MAP4K4O95819 1239 aaPredicted RBP26.52■■□□□ 1.84
PFDN4-205ENST00000493356 GCLCP48506 637 aaPredicted RBP26.52■■□□□ 1.84
PFDN4-205ENST00000493356 MTX1Q13505 466 aa26.52■■□□□ 1.84
PFDN4-205ENST00000493356 PI16Q6UXB8 463 aa26.52■■□□□ 1.84
PFDN4-205ENST00000493356 ZNF280CQ8ND82 737 aa26.52■■□□□ 1.84
PFDN4-205ENST00000493356 NSUN4Q96CB9 384 aaKnown RBP26.52■■□□□ 1.84
PFDN4-205ENST00000493356 PAWRQ96IZ0 340 aaKnown RBP26.52■■□□□ 1.84
PFDN4-205ENST00000493356 NEUROD6Q96NK8 337 aa26.52■■□□□ 1.84
PFDN4-205ENST00000493356 LDHCP07864 332 aa26.51■■□□□ 1.83
PFDN4-205ENST00000493356 HMGCS2P54868 508 aa26.51■■□□□ 1.83
PFDN4-205ENST00000493356 GSTO1P78417 241 aa26.51■■□□□ 1.83
PFDN4-205ENST00000493356 TBC1D9Q6ZT07 1266 aa26.51■■□□□ 1.83
PFDN4-205ENST00000493356 SPATA5Q8NB90 893 aa26.51■■□□□ 1.83
PFDN4-205ENST00000493356 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.51■■□□□ 1.83
PFDN4-205ENST00000493356 GNAI3P08754 354 aa26.5■■□□□ 1.83
PFDN4-205ENST00000493356 CAP2P40123 477 aa26.5■■□□□ 1.83
PFDN4-205ENST00000493356 RRP1BQ14684 758 aaKnown RBP26.5■■□□□ 1.83
PFDN4-205ENST00000493356 TBC1D2Q9BYX2 928 aa26.5■■□□□ 1.83
PFDN4-205ENST00000493356 PABPC4Q13310 644 aaKnown RBP eCLIP26.49■■□□□ 1.83
PFDN4-205ENST00000493356 DIS3LQ8TF46 1054 aaKnown RBP26.49■■□□□ 1.83
PFDN4-205ENST00000493356 ASCC2Q9H1I8 757 aaPredicted RBP26.49■■□□□ 1.83
PFDN4-205ENST00000493356 HMGCRP04035 888 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 GORABQ5T7V8 394 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 NECAB2Q7Z6G3 386 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 RAI14Q9P0K7 980 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 STAP2Q9UGK3 403 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 GJD2Q9UKL4 321 aa26.48■■□□□ 1.83
PFDN4-205ENST00000493356 PLXNB2O15031 1838 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 SIPA1L1O43166 1804 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 USP17L5A8MUK1 530 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 ARID4AP29374 1257 aaPredicted RBP26.47■■□□□ 1.83
PFDN4-205ENST00000493356 RARSP54136 660 aaKnown RBP26.47■■□□□ 1.83
PFDN4-205ENST00000493356 SH3D19Q5HYK7 790 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 TEX11Q8IYF3 940 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 ARHGAP45Q92619 1136 aa26.47■■□□□ 1.83
PFDN4-205ENST00000493356 HERC5Q9UII4 1024 aaKnown RBP26.47■■□□□ 1.83
PFDN4-205ENST00000493356 SOX1O00570 391 aaPredicted RBP26.46■■□□□ 1.83
PFDN4-205ENST00000493356 ANKLE1Q8NAG6 615 aa26.46■■□□□ 1.83
PFDN4-205ENST00000493356 MCAMP43121 646 aa26.45■■□□□ 1.82
PFDN4-205ENST00000493356 COL6A3P12111 3177 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 RPTORQ8N122 1335 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 TRIM32Q13049 653 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 SH3RF3Q8TEJ3 882 aaPredicted RBP26.44■■□□□ 1.82
PFDN4-205ENST00000493356 LRCH3Q96II8 777 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 AS3MTQ9HBK9 375 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 HMX1Q9NP08 348 aaPredicted RBP26.44■■□□□ 1.82
PFDN4-205ENST00000493356 MORF4L1Q9UBU8 362 aa26.44■■□□□ 1.82
PFDN4-205ENST00000493356 WDR18Q9BV38 432 aa26.43■■□□□ 1.82
PFDN4-205ENST00000493356 LRP2BPQ9P2M1 347 aa26.43■■□□□ 1.82
PFDN4-205ENST00000493356 PI4KBQ9UBF8 816 aa26.43■■□□□ 1.82
PFDN4-205ENST00000493356 MAST2Q6P0Q8 1798 aa26.43■■□□□ 1.82
PFDN4-205ENST00000493356 DDX60LQ5H9U9 1706 aaKnown RBP26.42■■□□□ 1.82
PFDN4-205ENST00000493356 C7orf61Q8IZ16 206 aa26.42■■□□□ 1.82
PFDN4-205ENST00000493356 GDF15Q99988 308 aa26.42■■□□□ 1.82
PFDN4-205ENST00000493356 DHX36Q9H2U1 1008 aaKnown RBP26.42■■□□□ 1.82
PFDN4-205ENST00000493356 CDK5RAP2Q96SN8 1893 aa26.42■■□□□ 1.82
PFDN4-205ENST00000493356 UQCRFS1P1P0C7P4 283 aa26.41■■□□□ 1.82
PFDN4-205ENST00000493356 MNX1P50219 401 aaPredicted RBP26.41■■□□□ 1.82
PFDN4-205ENST00000493356 MTMR2Q13614 643 aa26.41■■□□□ 1.82
PFDN4-205ENST00000493356 TRIB2Q92519 343 aa26.41■■□□□ 1.82
PFDN4-205ENST00000493356 NOL10Q9BSC4 688 aaKnown RBP26.41■■□□□ 1.82
PFDN4-205ENST00000493356 NBPF3Q9H094 633 aa26.41■■□□□ 1.82
PFDN4-205ENST00000493356 FOCADQ5VW36 1801 aa26.4■■□□□ 1.82
PFDN4-205ENST00000493356 PNMA6EA0A0J9YXQ4 647 aa26.4■■□□□ 1.82
PFDN4-205ENST00000493356 ASNSP08243 561 aa26.4■■□□□ 1.82
PFDN4-205ENST00000493356 BACE1P56817 501 aa26.4■■□□□ 1.82
PFDN4-205ENST00000493356 IRX3P78415 501 aaPredicted RBP26.4■■□□□ 1.82
PFDN4-205ENST00000493356 AATFQ9NY61 560 aaKnown RBP eCLIP26.4■■□□□ 1.82
PFDN4-205ENST00000493356 GNAI2P04899 355 aa26.39■■□□□ 1.82
PFDN4-205ENST00000493356 HOXA7P31268 230 aaPredicted RBP26.39■■□□□ 1.82
PFDN4-205ENST00000493356 BMP8BP34820 402 aa26.39■■□□□ 1.82
PFDN4-205ENST00000493356 JAG1P78504 1218 aa26.39■■□□□ 1.82
PFDN4-205ENST00000493356 G3BP1Q13283 466 aaKnown RBP eCLIP26.39■■□□□ 1.82
PFDN4-205ENST00000493356 P2RX7Q99572 595 aaKnown RBP26.39■■□□□ 1.82
PFDN4-205ENST00000493356 DNAJC18Q9H819 358 aa26.39■■□□□ 1.82
PFDN4-205ENST00000493356 TMOD4Q9NZQ9 345 aa26.39■■□□□ 1.82
PFDN4-205ENST00000493356 ZMYND8Q9ULU4 1186 aaPredicted RBP26.39■■□□□ 1.82
PFDN4-205ENST00000493356 BAG3O95817 575 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 CYP2B6P20813 491 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 MAP3K21Q5TCX8 1036 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 NAA16Q6N069 864 aaPredicted RBP26.38■■□□□ 1.81
PFDN4-205ENST00000493356 SLC17A8Q8NDX2 589 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 TXNRD2Q9NNW7 524 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 SNRKQ9NRH2 765 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 OGDHLQ9ULD0 1010 aa26.38■■□□□ 1.81
PFDN4-205ENST00000493356 PEX10O60683 326 aa26.37■■□□□ 1.81
PFDN4-205ENST00000493356 PLCG2P16885 1265 aa26.37■■□□□ 1.81
PFDN4-205ENST00000493356 PPP4CP60510 307 aa26.37■■□□□ 1.81
PFDN4-205ENST00000493356 SHROOM1Q2M3G4 852 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms