RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 RPTORQ8N122 1335 aa13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 IGSF3O75054 1194 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 ADORA1P30542 326 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 SPP2Q13103 211 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 TREML2Q5T2D2 321 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 SLC17A8Q8NDX2 589 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 NBPF3Q9H094 633 aa13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 HMX1Q9NP08 348 aaPredicted RBP13.59□□□□□ -0.23
SNRNP200-207ENST00000493271 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 GNAI3P08754 354 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 CAP2P40123 477 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 TIMM10P62072 90 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 MTX1Q13505 466 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 SOCS4Q8WXH5 440 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 GDF15Q99988 308 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 GINM1Q9NU53 330 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 MORF4L1Q9UBU8 362 aa13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
SNRNP200-207ENST00000493271 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 NSUN4Q96CB9 384 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 WDR18Q9BV38 432 aa13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 ASCC2Q9H1I8 757 aaPredicted RBP13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
SNRNP200-207ENST00000493271 SRGAP3O43295 1099 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 BAG3O95817 575 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 ASNSP08243 561 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 PLCG2P16885 1265 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 HMGCS2P54868 508 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 LRIT3Q3SXY7 679 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 GTF3C2Q8WUA4 911 aaPredicted RBP13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 C11orf49Q9H6J7 331 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 OGDHLQ9ULD0 1010 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
SNRNP200-207ENST00000493271 C19orf81C9J6K1 198 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 DLL1O00548 723 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 ARID4AP29374 1257 aaPredicted RBP13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 TFCP2Q12800 502 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 MAP3K21Q5TCX8 1036 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 MEIS3Q99687 375 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 NUDT12Q9BQG2 462 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 RAI14Q9P0K7 980 aa13.55□□□□□ -0.24
SNRNP200-207ENST00000493271 SOX1O00570 391 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 MAPK4P31152 587 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 BACE1P56817 501 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 TEX11Q8IYF3 940 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 GPRC5AQ8NFJ5 357 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-207ENST00000493271 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 TDHQ8IZJ6 230 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 TRIB2Q92519 343 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
SNRNP200-207ENST00000493271 COL6A3P12111 3177 aa13.52□□□□□ -0.24
SNRNP200-207ENST00000493271 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 PPP4CP60510 307 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 HERVK_113P62684 666 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 MTMR2Q13614 643 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 CERS3Q8IU89 383 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 ALPK3Q96L96 1907 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 DOCK3Q8IZD9 2030 aa13.52□□□□□ -0.25
SNRNP200-207ENST00000493271 USP17L10C9JJH3 530 aa13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 RGS2P41220 211 aa13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.252e-15■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms