RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TMEM40Q8WWA1 233 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 BSNDQ8WZ55 320 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 CCDC136Q96JN2 1154 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
SND1-216ENST00000492840 SPATA9Q9BWV2 254 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 EMILIN2Q9BXX0 1053 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 PREX1Q8TCU6 1659 aa6.99□□□□□ -1.29
SND1-216ENST00000492840 A0A087X0B3 334 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 SENP3-EIF4A1A0A087X0R7 540 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 IRS4O14654 1257 aaPredicted RBP6.98□□□□□ -1.29
SND1-216ENST00000492840 PRC1O43663 620 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 LONRF2Q1L5Z9 754 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
SND1-216ENST00000492840 SLC10A6Q3KNW5 377 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 SCARA3Q6AZY7 606 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 ADAMTSL4Q6UY14 1074 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.98□□□□□ -1.29
SND1-216ENST00000492840 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 DDX42Q86XP3 938 aaKnown RBP eCLIP6.98□□□□□ -1.29
SND1-216ENST00000492840 CCAR1Q8IX12 1150 aaKnown RBP6.98□□□□□ -1.29
SND1-216ENST00000492840 ZSCAN1Q8NBB4 408 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 C8orf48Q96LL4 319 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 SLC26A8Q96RN1 970 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 CAAP1Q9H8G2 361 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 NDFIP2Q9NV92 336 aa6.98□□□□□ -1.29
SND1-216ENST00000492840 GEMIN8Q9NWZ8 242 aaKnown RBP6.98□□□□□ -1.29
SND1-216ENST00000492840 ARHGEF40Q8TER5 1519 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 SELPP16109 830 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR20EP86478 221 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR20CP86479 221 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR20DP86480 221 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR20BP86481 221 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR20AP86496 221 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PABPC4Q13310 644 aaKnown RBP eCLIP6.97□□□□□ -1.29
SND1-216ENST00000492840 NCAPHQ15003 741 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 HFE2Q6ZVN8 426 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 VN1R5Q7Z5H4 357 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 PDZD3Q86UT5 571 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 ZBTB38Q8NAP3 1195 aaPredicted RBP6.97□□□□□ -1.29
SND1-216ENST00000492840 PMM1Q92871 262 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 TCEAL9Q9UHQ7 104 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 DNMT3LQ9UJW3 386 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 YEATS2Q9ULM3 1422 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 SOX13Q9UN79 622 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 SLC12A7Q9Y666 1083 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 TTBK1Q5TCY1 1321 aaPredicted RBP6.97□□□□□ -1.29
SND1-216ENST00000492840 PRR36Q9H6K5 1346 aa6.97□□□□□ -1.29
SND1-216ENST00000492840 TTC37Q6PGP7 1564 aa6.96□□□□□ -1.29
SND1-216ENST00000492840 STRCQ7RTU9 1775 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 BNIP3LO60238 219 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 SUSD5O60279 629 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 PDE8AO60658 829 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 RFPL3O75679 317 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 HTR3BO95264 441 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 GHRHP01286 108 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 BMP1P13497 986 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 CD33P20138 364 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 PMLP29590 882 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 SOX5P35711 763 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 CDK8P49336 464 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 SCARF1Q14162 830 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 CBX2Q14781 532 aaPredicted RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 ZYXQ15942 572 aaKnown RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 ZC3H12BQ5HYM0 836 aaKnown RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 PERM1Q5SV97 790 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 MPRIPQ6WCQ1 1025 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 RNF180Q86T96 592 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 LRRC47Q8N1G4 583 aaKnown RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 ZNF526Q8TF50 670 aaPredicted RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
SND1-216ENST00000492840 MCM8Q9UJA3 840 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 LTBP4Q8N2S1 1624 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 LTBP3Q9NS15 1303 aa6.96□□□□□ -1.3
SND1-216ENST00000492840 ALG1L2C9J202 215 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
SND1-216ENST00000492840 ACRP10323 421 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 FAM50AQ14320 339 aaKnown RBP6.95□□□□□ -1.3
SND1-216ENST00000492840 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
SND1-216ENST00000492840 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 RIPOR1Q6ZS17 1223 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 TSR2Q969E8 191 aaKnown RBP6.95□□□□□ -1.3
SND1-216ENST00000492840 RELTQ969Z4 430 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 EPN3Q9H201 632 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
SND1-216ENST00000492840 PTPRTO14522 1441 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 ESRRAP11474 423 aaPredicted RBP6.94□□□□□ -1.3
SND1-216ENST00000492840 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
SND1-216ENST00000492840 NFKB2Q00653 900 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 MAP1SQ66K74 1059 aaPredicted RBP6.94□□□□□ -1.3
SND1-216ENST00000492840 UBR7Q8N806 425 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 ABHD17AQ96GS6 310 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 PHAXQ9H814 394 aaKnown RBP6.94□□□□□ -1.3
SND1-216ENST00000492840 NCOA5Q9HCD5 579 aaKnown RBP6.94□□□□□ -1.3
SND1-216ENST00000492840 GMIPQ9P107 970 aa6.94□□□□□ -1.3
SND1-216ENST00000492840 FER1L4A9Z1Z3 1794 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms