RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 HOXA5P20719 270 aa5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 CLCN7P51798 805 aa5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 ZC3H12CQ9C0D7 883 aaKnown RBP5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 EHD4Q9H223 541 aa5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 CCDC86Q9H6F5 360 aaKnown RBP5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 DCTN4Q9UJW0 460 aa5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 CCDC9Q9Y3X0 531 aaKnown RBP5.17□□□□□ -1.58
HMGB1P30-201ENST00000492455 IGF2BP3O00425 579 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 RAC2P15153 192 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 GDNFP39905 211 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 KIF4BQ2VIQ3 1234 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 NPAS4Q8IUM7 802 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 SPACA3Q8IXA5 215 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 GALNT12Q8IXK2 581 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 GJD3Q8N144 294 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 WDR89Q96FK6 387 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 FAM129BQ96TA1 746 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 RBCK1Q9BYM8 510 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 KRT82Q9NSB4 513 aa5.16□□□□□ -1.58
HMGB1P30-201ENST00000492455 GPR182O15218 404 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 NEFLP07196 543 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 MED14OSP0DP75 135 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 GLDCP23378 1020 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 ITPKAP23677 461 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 MAPK1P28482 360 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 TMC7Q7Z402 723 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 HEXIM2Q96MH2 286 aaKnown RBP5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 ASB16Q96NS5 453 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 SLC26A8Q96RN1 970 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 ZCCHC4Q9H5U6 513 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 CARS2Q9HA77 564 aaKnown RBP5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 PITPNM2Q9BZ72 1349 aa5.15□□□□□ -1.59
HMGB1P30-201ENST00000492455 GSTP1P09211 210 aaKnown RBP5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 LINC00310P59036 64 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 PTPN12Q05209 780 aaKnown RBP5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 DSC3Q14574 896 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 RPS26P11Q5JNZ5 115 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 KCNN1Q92952 543 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 ISL2Q96A47 359 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 FOXQ1Q9C009 403 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 PARD6AQ9NPB6 346 aa5.14□□□□□ -1.59
HMGB1P30-201ENST00000492455 ANKRD33BA6NCL7 494 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 FAM155AB1AL88 458 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 TREHO43280 583 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 ZNF862O60290 1169 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 SYN1P17600 705 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 KIAA0319Q5VV43 1072 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 KCNB2Q92953 911 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 IRF2BPLQ9H1B7 796 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 PRDM10Q9NQV6 1147 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 PICK1Q9NRD5 415 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 BRPF3Q9ULD4 1205 aa5.13□□□□□ -1.59
HMGB1P30-201ENST00000492455 ETV2O00321 342 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 NDUFB5O43674 189 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 FOXD2O60548 495 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 PPP2R3AQ06190 1150 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 FMR1Q06787 632 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 NKPD1Q17RQ9 610 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 FBXO33Q7Z6M2 555 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 RNF214Q8ND24 703 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 ABHD4Q8TB40 342 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 BORCS6Q96GS4 357 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 C20orf173Q96LM9 149 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 CITED4Q96RK1 184 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 PRDM5Q9NQX1 630 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 PCDHGC5Q9Y5F6 944 aa5.12□□□□□ -1.59
HMGB1P30-201ENST00000492455 NEFMP07197 916 aa5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 P4HBP07237 508 aaKnown RBP5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 BMP7P18075 431 aa5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 ZNF157P51786 506 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 ERVK-24P63145 666 aa5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 ERICH6BQ5W0A0 696 aa5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 ZNF428Q96B54 188 aa5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 ALKBH8Q96BT7 664 aaKnown RBP5.11□□□□□ -1.59
HMGB1P30-201ENST00000492455 NFIXQ14938 502 aa5.1□□□□□ -1.59
HMGB1P30-201ENST00000492455 MAPK8IP1Q9UQF2 711 aa5.1□□□□□ -1.59
HMGB1P30-201ENST00000492455 ERCC3P19447 782 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 ORC1Q13415 861 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 CDC37L1Q7L3B6 337 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 FAM214BQ7L5A3 538 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 ACSBG1Q96GR2 724 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 DMRTB1Q96MA1 342 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 ALPK1Q96QP1 1244 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 SETDB2Q96T68 719 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 ATP13A1Q9HD20 1204 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 C19orf73Q9NVV2 129 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 GPN3Q9UHW5 284 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 TRAK1Q9UPV9 953 aa5.09□□□□□ -1.59
HMGB1P30-201ENST00000492455 GADD45BO75293 160 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 ZC3H12AQ5D1E8 599 aaKnown RBP5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 TTC6Q86TZ1 520 aa5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 ZSCAN29Q8IWY8 852 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 HSPA12BQ96MM6 686 aa5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 NIF3L1Q9GZT8 377 aa5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 KCNK12Q9HB15 430 aa5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 ABCB6Q9NP58 842 aa5.08□□□□□ -1.6
HMGB1P30-201ENST00000492455 NPHS2Q9NP85 383 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms