RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ATP1A2P50993 1020 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 EPHB1P54762 984 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 FAM160A1Q05DH4 1040 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 PKP1Q13835 747 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 TTF1Q15361 905 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 EML3Q32P44 896 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 MCTP1Q6DN14 999 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 ASTLQ6HA08 431 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 HS2ST1Q7LGA3 356 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 KIAA0907Q7Z7F0 614 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 TRIM50Q86XT4 487 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 MYO1HQ8N1T3 1032 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 CLASRPQ8N2M8 674 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 RUFY2Q8WXA3 655 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 RAPGEF4Q8WZA2 1011 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 E2F7Q96AV8 911 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 GPRASP2Q96D09 838 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 KAZALD1Q96I82 304 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 SUCLG2Q96I99 432 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 TTC14Q96N46 770 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 PPP1R9BQ96SB3 815 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 SETDB2Q96T68 719 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 ZNF700Q9H0M5 742 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 ZNF408Q9H9D4 720 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 SLC52A2Q9HAB3 445 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 RRAGDQ9NQL2 400 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 ECHDC1Q9NTX5 307 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 GGT7Q9UJ14 662 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 SPG7Q9UQ90 795 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 ATP8A1Q9Y2Q0 1164 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 SNX14Q9Y5W7 946 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 DDX49Q9Y6V7 483 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 KDM6AO15550 1401 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 CRYBG1Q9Y4K1 1723 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 NPHP3Q7Z494 1330 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 MRC1P22897 1456 aa4.43□□□□□ -1.7
ATPAF1-206ENST00000492233 CPDO75976 1380 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 ALS2Q96Q42 1657 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 PRAMEF22A3QJZ6 481 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 A6NJY4 79 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 HIP1O00291 1037 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 MBD3O95983 291 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 IGKV5-2P06315 115 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 RRM1P23921 792 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CTHP32929 405 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CASP2P42575 452 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 PPM1FP49593 454 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CLDN10P78369 228 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CCDC173Q0VFZ6 552 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 NFX1Q12986 1120 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 NAA30Q147X3 362 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 SETDB1Q15047 1291 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 ZNF790Q6PG37 636 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CAPN12Q6ZSI9 719 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 C16orf86Q6ZW13 317 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 KRT26Q7Z3Y9 468 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 LRP10Q7Z4F1 713 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 ZSCAN30Q86W11 494 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 SMAP1Q8IYB5 467 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 IFNL2Q8IZJ0 200 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 LILRB2Q8N423 598 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 ATL2Q8NHH9 583 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 TRPM4Q8TD43 1214 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 TM6SF1Q9BZW5 370 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 PTPRHQ9HD43 1115 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 C9orf78Q9NZ63 289 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 CEP126Q9P2H0 1117 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 FEZ2Q9UHY8 353 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 METRNQ9UJH8 293 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 HDAC9Q9UKV0 1011 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 ERBB4Q15303 1308 aa4.42□□□□□ -1.7
ATPAF1-206ENST00000492233 MEGF6O75095 1541 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TNS3Q68CZ2 1445 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SIPA1L3O60292 1781 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TMEM238LA0A1B0GVL6 79 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SHTN1A0MZ66 631 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 RCCD1A6NED2 376 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TTLL13PA6NNM8 815 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 NEURL1BA8MQ27 555 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ZBBXA8MT70 800 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 RNASEH2AO75792 299 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SASH1O94885 1247 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SCGB1D2O95969 90 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SNRPA1P09661 255 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 IFIT2P09913 472 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 FAM200BP0CF97 657 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 MZF1P28698 734 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TIE1P35590 1138 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ETFBP38117 255 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 NEXNQ0ZGT2 675 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 G3BP1Q13283 466 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 MTMR2Q13614 643 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 MORC3Q14149 939 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SIM2Q14190 667 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 GCKRQ14397 625 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 RASA3Q14644 834 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CWF19L2Q2TBE0 894 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ZSCAN23Q3MJ62 389 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms