RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 RPS6KA2Q15349 733 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 CC2D2AQ9P2K1 1620 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 SYNJ2BP-COX16A0A087WUM0 186 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 NR1I2O75469 434 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 TRAPPC10P48553 1259 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 ASIC2Q16515 512 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 KIAA1841Q6NSI8 718 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 MIER3Q7Z3K6 550 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 TMX3Q96JJ7 454 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 COX16Q9P0S2 106 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 ERICH3Q5RHP9 1530 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 NDUFB5O43674 189 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 ZNF18P17022 549 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 PRIM1P49642 420 aaKnown RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 EVCP57679 992 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 RNASELQ05823 741 aaKnown RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.55□□□□□ -1.23e-12■■□□□ 14.2
UBP1-212ENST00000492136 MAGED2Q9UNF1 606 aaPredicted RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 CCDC169A6NNP5 214 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 NDUFAB1O14561 156 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 HHATQ5VTY9 493 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 TAOK1Q7L7X3 1001 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 PNMA8AQ86V59 439 aaPredicted RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 CSRNP2Q9H175 543 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 SAP30BPQ9UHR5 308 aaKnown RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 PLEKHG3A1L390 1219 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 CHMP2AO43633 222 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 TRPC3Q13507 836 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 MRPS27Q92552 414 aaKnown RBP7.55□□□□□ -1.2
UBP1-212ENST00000492136 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 VPS16Q9H269 839 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 LMTK3Q96Q04 1460 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 KRT19P08727 400 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 UBE3BQ7Z3V4 1068 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 PALM2Q8IXS6 379 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 ZKSCAN3Q9BRR0 538 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 SYTL2Q9HCH5 934 aa7.55□□□□□ -1.2
UBP1-212ENST00000492136 AKR1B15C9JRZ8 316 aaPredicted RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 CASP2P42575 452 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 BRD3Q15059 726 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 SRGAP1Q7Z6B7 1085 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 MAGEB6Q8N7X4 407 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 ZMAT2Q96NC0 199 aaKnown RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 TNFAIP3P21580 790 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 CHRNA2Q15822 529 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 U2AF2P26368 475 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■■□□□ 11.4
UBP1-212ENST00000492136 VPS41P49754 854 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 DCPSQ96C86 337 aaKnown RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 RIOK1Q9BRS2 568 aaKnown RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 RBSNQ9H1K0 784 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 TNNI2P48788 182 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 SLC8A3P57103 927 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 BEND3Q5T5X7 828 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 SCYL1Q96KG9 808 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 VWA3AA6NCI4 1184 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 NAA16Q6N069 864 aaPredicted RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 C8orf74Q6P047 294 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 VSIG1Q86XK7 387 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 UBL4BQ8N7F7 174 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 UBN1Q9NPG3 1134 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 PTPRCP08575 1304 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 ARHGAP42A6NI28 874 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 LDHCP07864 332 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 DENND2CQ68D51 928 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 PPP1R42Q7Z4L9 355 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 NCAPGQ9BPX3 1015 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 NOC4LQ9BVI4 516 aaKnown RBP7.54□□□□□ -1.2
UBP1-212ENST00000492136 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 MYO1AQ9UBC5 1043 aa7.54□□□□□ -1.2
UBP1-212ENST00000492136 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
UBP1-212ENST00000492136 RARSP54136 660 aaKnown RBP7.53□□□□□ -1.2
UBP1-212ENST00000492136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.53□□□□□ -1.23e-7■■■□□ 18.4
UBP1-212ENST00000492136 ESR2Q92731 530 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 BRF1Q92994 677 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 EFCC1Q9HA90 598 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 TBC1D7Q9P0N9 293 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 CCDC152Q4G0S7 254 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
UBP1-212ENST00000492136 LRRC9Q6ZRR7 1453 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 PEX19P40855 299 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 TCP10Q12799 353 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 RNF168Q8IYW5 571 aaPredicted RBP7.53□□□□□ -1.2
UBP1-212ENST00000492136 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 ASIC3Q9UHC3 531 aa7.53□□□□□ -1.2
UBP1-212ENST00000492136 RBM8AQ9Y5S9 174 aaKnown RBP7.53□□□□□ -1.2
UBP1-212ENST00000492136 ZSCAN20P17040 1043 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms