RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 DDX4Q9NQI0 724 aaKnown RBP10.7□□□□□ -0.7
NUP50-217ENST00000491860 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 CPA4Q9UI42 421 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 TNNQ9UQP3 1299 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 TRIOBPQ9H2D6 2365 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 ADGRA2Q96PE1 1338 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 RANBP2P49792 3224 aaKnown RBP10.69□□□□□ -0.7
NUP50-217ENST00000491860 HMMRO75330 724 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
NUP50-217ENST00000491860 BCRP11274 1271 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 UBXN2AP68543 259 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 GADL1Q6ZQY3 521 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 FOXP4Q8IVH2 680 aaPredicted RBP10.69□□□□□ -0.7
NUP50-217ENST00000491860 SMCR8Q8TEV9 937 aaPredicted RBP10.69□□□□□ -0.7
NUP50-217ENST00000491860 DBNDD2Q9BQY9 259 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 AGTPBP1Q9UPW5 1226 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 PHIPQ8WWQ0 1821 aa10.69□□□□□ -0.7
NUP50-217ENST00000491860 CEP290O15078 2479 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 MGAMO43451 1857 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 MYPNQ86TC9 1320 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 TRIM75PA6NK02 468 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 HLA-DOAP06340 250 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 ASNSP08243 561 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 CAP2P40123 477 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 GCLCP48506 637 aaPredicted RBP10.68□□□□□ -0.7
NUP50-217ENST00000491860 TTF1Q15361 905 aaPredicted RBP10.68□□□□□ -0.7
NUP50-217ENST00000491860 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 PI16Q6UXB8 463 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
NUP50-217ENST00000491860 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 PRO3102Q9H379 93 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 AATFQ9NY61 560 aaKnown RBP eCLIP10.68□□□□□ -0.7
NUP50-217ENST00000491860 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
NUP50-217ENST00000491860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.68□□□□□ -0.7
NUP50-217ENST00000491860 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
NUP50-217ENST00000491860 OSBPP22059 807 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 GRK4P32298 578 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 UBE2Q1Q7Z7E8 422 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 METTL16Q86W50 562 aaKnown RBP10.67□□□□□ -0.7
NUP50-217ENST00000491860 CRACR2BQ8N4Y2 399 aaPredicted RBP10.67□□□□□ -0.7
NUP50-217ENST00000491860 SH3RF3Q8TEJ3 882 aaPredicted RBP10.67□□□□□ -0.7
NUP50-217ENST00000491860 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 DBNLQ9UJU6 430 aaKnown RBP10.67□□□□□ -0.7
NUP50-217ENST00000491860 ZSWIM8A7E2V4 1837 aa10.67□□□□□ -0.7
NUP50-217ENST00000491860 FLT1P17948 1338 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 C19orf81C9J6K1 198 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 CYP2C8P10632 490 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 RLBP1P12271 317 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 ZAP70P43403 619 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 FAM110CQ1W6H9 321 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
NUP50-217ENST00000491860 SH3TC2Q8TF17 1288 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUP50-217ENST00000491860 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
NUP50-217ENST00000491860 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 COA7Q96BR5 231 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 SHISA4Q96DD7 197 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 KIF1BPQ96EK5 621 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 WDR18Q9BV38 432 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
NUP50-217ENST00000491860 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 CDK5RAP2Q96SN8 1893 aa10.66□□□□□ -0.7
NUP50-217ENST00000491860 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 TNPO2O14787 897 aaKnown RBP10.65□□□□□ -0.7
NUP50-217ENST00000491860 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 IDH1O75874 414 aaKnown RBP10.65□□□□□ -0.7
NUP50-217ENST00000491860 CYP7A1P22680 504 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 SPP2Q13103 211 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 IRF5Q13568 498 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 AACSQ86V21 672 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
NUP50-217ENST00000491860 EAF2Q96CJ1 260 aaPredicted RBP10.65□□□□□ -0.7
NUP50-217ENST00000491860 CCDC8Q9H0W5 538 aaPredicted RBP10.65□□□□□ -0.7
NUP50-217ENST00000491860 BIN2Q9UBW5 565 aaPredicted RBP10.65□□□□□ -0.7
NUP50-217ENST00000491860 MYH1P12882 1939 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 GJB1P08034 283 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 USP5P45974 858 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 GJA8P48165 433 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 MAPKAPK5Q8IW41 473 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 HTATIP2Q9BUP3 242 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 EHD4Q9H223 541 aa10.64□□□□□ -0.71
NUP50-217ENST00000491860 PIH1D3Q9NQM4 214 aaKnown RBP10.64□□□□□ -0.71
NUP50-217ENST00000491860 COL6A3P12111 3177 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms