RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 SIPA1L1O43166 1804 aa22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 CETPP11597 493 aa22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 SNAPC2Q13487 334 aa22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 RWDD1Q9H446 243 aaPredicted RBP22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 HERC5Q9UII4 1024 aaKnown RBP22.44■■□□□ 1.18
NDUFB4-204ENST00000491335 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 GPR25O00155 361 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 CHGBP05060 677 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 PTPRAP18433 802 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 SLC4A8Q2Y0W8 1093 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 FOXP4Q8IVH2 680 aaPredicted RBP22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 ZHX2Q9Y6X8 837 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 DOCK1Q14185 1865 aa22.43■■□□□ 1.18
NDUFB4-204ENST00000491335 IGHDP01880 384 aa22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 RRP1BQ14684 758 aaKnown RBP22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 UBE3CQ15386 1083 aa22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 LCORLQ8N3X6 602 aa22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 CRNKL1Q9BZJ0 848 aaKnown RBP22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 KCNH4Q9UQ05 1017 aa22.42■■□□□ 1.18
NDUFB4-204ENST00000491335 IFFO2Q5TF58 517 aa22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 ZSCAN25Q6NSZ9 544 aa22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 METTL16Q86W50 562 aaKnown RBP22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 FAM43AQ8N2R8 423 aa22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 CRACR2BQ8N4Y2 399 aaPredicted RBP22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 PI4K2BQ8TCG2 481 aa22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 ZNF296Q8WUU4 475 aaPredicted RBP22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 ARMT1Q9H993 441 aa22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.41■■□□□ 1.18
NDUFB4-204ENST00000491335 ERC2O15083 957 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 HLA-DOAP06340 250 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 MX1P20591 662 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 CAP2P40123 477 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 CRHR2Q13324 411 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 CCDC84Q86UT8 332 aaPredicted RBP22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 KBTBD3Q8NAB2 608 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 DNAJC18Q9H819 358 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 AFG3L2Q9Y4W6 797 aa22.4■■□□□ 1.18
NDUFB4-204ENST00000491335 SALL3Q9BXA9 1300 aa22.39■■□□□ 1.18
NDUFB4-204ENST00000491335 PHIPQ8WWQ0 1821 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 BTBD19C9JJ37 291 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 CXCL11O14625 94 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 GLRX3O76003 335 aaKnown RBP22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 MBD4O95243 580 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 SMC5Q8IY18 1101 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 TRIM34Q9BYJ4 488 aa22.39■■□□□ 1.17
NDUFB4-204ENST00000491335 ATAD5Q96QE3 1844 aa22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 PRKAB2O43741 272 aa22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 DGKZQ13574 1117 aa22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 TAF1CQ15572 869 aaPredicted RBP22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 B4GALNT3Q6L9W6 998 aa22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 SDR42E1Q8WUS8 393 aa22.38■■□□□ 1.17
NDUFB4-204ENST00000491335 FKTNO75072 461 aa22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 MOGSQ13724 837 aa22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 TTC6Q86TZ1 520 aa22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 MCM9Q9NXL9 1143 aa22.37■■□□□ 1.17
NDUFB4-204ENST00000491335 POLR3DP05423 398 aaPredicted RBP22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 PLCD1P51178 756 aa22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 JAG1P78504 1218 aa22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 ZFYVE28Q9HCC9 887 aa22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 DCP1AQ9NPI6 582 aaPredicted RBP22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 STAP2Q9UGK3 403 aa22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 NAV1Q8NEY1 1877 aa22.36■■□□□ 1.17
NDUFB4-204ENST00000491335 PTPRFP10586 1907 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 RNF113AO15541 343 aaKnown RBP22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 PDE1AP54750 535 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 ANKRD23Q86SG2 305 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 MCOLN1Q9GZU1 580 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 EHD4Q9H223 541 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 ZCCHC17Q9NP64 241 aaKnown RBP22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 SERPINB13Q9UIV8 391 aa22.35■■□□□ 1.17
NDUFB4-204ENST00000491335 BAZ2AQ9UIF9 1905 aaKnown RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 A0A0G2JLL6 359 aaPredicted RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 USP17L5A8MUK1 530 aa22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 EVX2Q03828 476 aa22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 SHROOM1Q2M3G4 852 aaPredicted RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 PRRT2Q7Z6L0 340 aaPredicted RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 CTU1Q7Z7A3 348 aaKnown RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 OSBP2Q969R2 916 aa22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 ATP8A2Q9NTI2 1148 aa22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 DDX60LQ5H9U9 1706 aaKnown RBP22.34■■□□□ 1.17
NDUFB4-204ENST00000491335 PDHXO00330 501 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 GDF11O95390 407 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 ZFYP08048 801 aaPredicted RBP22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 SPP2Q13103 211 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 GPAT2Q6NUI2 795 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 APPBP2Q92624 585 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 ABHD8Q96I13 439 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 SLC4A4Q9Y6R1 1079 aa22.33■■□□□ 1.17
NDUFB4-204ENST00000491335 CAPN15O75808 1086 aa22.32■■□□□ 1.16
NDUFB4-204ENST00000491335 ASNSP08243 561 aa22.32■■□□□ 1.16
NDUFB4-204ENST00000491335 CYP2D6P10635 497 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms