RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
AGAP3-222	ENST00000490839	ATAD5	Q96QE3	1844 aa		18.9	■□□□□ 0.62
AGAP3-222	ENST00000490839		A0A1B0GUL7	405 aa		18.89	■□□□□ 0.61
AGAP3-222	ENST00000490839	TIMM10	P62072	90 aa		18.89	■□□□□ 0.61
AGAP3-222	ENST00000490839	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
AGAP3-222	ENST00000490839	API5	Q9BZZ5	524 aa	Known RBP	18.89	■□□□□ 0.61
AGAP3-222	ENST00000490839	AKAP2	Q9Y2D5	859 aa		18.89	■□□□□ 0.61
AGAP3-222	ENST00000490839	SOX1	O00570	391 aa	Predicted RBP	18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	SPP2	Q13103	211 aa		18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	ZNF280C	Q8ND82	737 aa		18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	DIS3L	Q8TF46	1054 aa	Known RBP	18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	ZNF384	Q8TF68	577 aa		18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	XAGE2	Q96GT9	111 aa		18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	STAP2	Q9UGK3	403 aa		18.88	■□□□□ 0.61
AGAP3-222	ENST00000490839	FAM196B	A6NMK8	535 aa		18.87	■□□□□ 0.61
AGAP3-222	ENST00000490839	CT47B1	P0C2W7	299 aa	Predicted RBP	18.87	■□□□□ 0.61
AGAP3-222	ENST00000490839	GSTO1	P78417	241 aa		18.87	■□□□□ 0.61
AGAP3-222	ENST00000490839	SLC17A8	Q8NDX2	589 aa		18.87	■□□□□ 0.61
AGAP3-222	ENST00000490839	NOB1	Q9ULX3	412 aa	Known RBP	18.87	■□□□□ 0.61
AGAP3-222	ENST00000490839	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	LDHC	P07864	332 aa		18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	HMGCS2	P54868	508 aa		18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	TFCP2	Q12800	502 aa		18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	LRCH3	Q96II8	777 aa		18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	MEIS3	Q99687	375 aa		18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.86	■□□□□ 0.61
AGAP3-222	ENST00000490839	RPTOR	Q8N122	1335 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	USP17L5	A8MUK1	530 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	BMP8B	P34820	402 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	CAP2	P40123	477 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	SH3D19	Q5HYK7	790 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	C7orf61	Q8IZ16	206 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	NSUN4	Q96CB9	384 aa	Known RBP	18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	GDF15	Q99988	308 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	AS3MT	Q9HBK9	375 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	HMX1	Q9NP08	348 aa	Predicted RBP	18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	HMG20B	Q9P0W2	317 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	GJD2	Q9UKL4	321 aa		18.85	■□□□□ 0.61
AGAP3-222	ENST00000490839	PLXNB2	O15031	1838 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	DDX60L	Q5H9U9	1706 aa	Known RBP	18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	SRGAP3	O43295	1099 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	MTX1	Q13505	466 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	GPR153	Q6NV75	609 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	SPATA5	Q8NB90	893 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	NBPF3	Q9H094	633 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	MORF4L1	Q9UBU8	362 aa		18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	HERC5	Q9UII4	1024 aa	Known RBP	18.84	■□□□□ 0.61
AGAP3-222	ENST00000490839	DLL1	O00548	723 aa		18.83	■□□□□ 0.6
AGAP3-222	ENST00000490839	TEX11	Q8IYF3	940 aa		18.83	■□□□□ 0.6
AGAP3-222	ENST00000490839	CDCA7L	Q96GN5	454 aa		18.83	■□□□□ 0.6
AGAP3-222	ENST00000490839	RAI14	Q9P0K7	980 aa		18.83	■□□□□ 0.6
AGAP3-222	ENST00000490839	COL6A3	P12111	3177 aa		18.83	■□□□□ 0.6
AGAP3-222	ENST00000490839	SIPA1L1	O43166	1804 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	GNAI3	P08754	354 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	ARID4A	P29374	1257 aa	Predicted RBP	18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	IRX3	P78415	501 aa	Predicted RBP	18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	TRIM32	Q13049	653 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	RRP1B	Q14684	758 aa	Known RBP	18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	GORAB	Q5T7V8	394 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	PI16	Q6UXB8	463 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	TRMT2A	Q8IZ69	625 aa	Known RBP	18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	NEUROD6	Q96NK8	337 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	C11orf49	Q9H6J7	331 aa		18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.82	■□□□□ 0.6
AGAP3-222	ENST00000490839	MAST2	Q6P0Q8	1798 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	MNX1	P50219	401 aa	Predicted RBP	18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	TBC1D9	Q6ZT07	1266 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	SOCS4	Q8WXH5	440 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	TRIB2	Q92519	343 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	WDR18	Q9BV38	432 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	OGDHL	Q9ULD0	1010 aa		18.81	■□□□□ 0.6
AGAP3-222	ENST00000490839	ASNS	P08243	561 aa		18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	MTMR2	Q13614	643 aa		18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	MAP3K21	Q5TCX8	1036 aa		18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	NOL10	Q9BSC4	688 aa	Known RBP	18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	DHX36	Q9H2U1	1008 aa	Known RBP	18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	TMOD4	Q9NZQ9	345 aa		18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	PI4KB	Q9UBF8	816 aa		18.8	■□□□□ 0.6
AGAP3-222	ENST00000490839	XRCC5	P13010	732 aa	Known RBP	18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	PRKAR2A	P13861	404 aa	Known RBP	18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	HOXA7	P31268	230 aa	Predicted RBP	18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	BACE1	P56817	501 aa		18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	LRP2BP	Q9P2M1	347 aa		18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839		A0A0C4DFX4	3053 aa		18.79	■□□□□ 0.6
AGAP3-222	ENST00000490839	UQCRFS1P1	P0C7P4	283 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	PLCG2	P16885	1265 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	CYP2B6	P20813	491 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	MCAM	P43121	646 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	MAGEA10	P43363	369 aa	Predicted RBP	18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	LRIT3	Q3SXY7	679 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	TRMT44	Q8IYL2	757 aa	Known RBP	18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	GPRC5A	Q8NFJ5	357 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	ARHGAP45	Q92619	1136 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	NUDT12	Q9BQG2	462 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	FOCAD	Q5VW36	1801 aa		18.78	■□□□□ 0.6
AGAP3-222	ENST00000490839	C19orf81	C9J6K1	198 aa		18.77	■□□□□ 0.6
AGAP3-222	ENST00000490839	BAG3	O95817	575 aa		18.77	■□□□□ 0.6
AGAP3-222	ENST00000490839	SYN1	P17600	705 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms