RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.47■□□□□ 0.55
COL27A1-206ENST00000490831 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
COL27A1-206ENST00000490831 EDC3Q96F86 508 aaKnown RBP18.46■□□□□ 0.55
COL27A1-206ENST00000490831 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
COL27A1-206ENST00000490831 AFG3L2Q9Y4W6 797 aa18.46■□□□□ 0.55
COL27A1-206ENST00000490831 PHIPQ8WWQ0 1821 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 FAM196BA6NMK8 535 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 TAF1CQ15572 869 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-206ENST00000490831 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
COL27A1-206ENST00000490831 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 ZFYVE28Q9HCC9 887 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 ZHX2Q9Y6X8 837 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 ZNF532Q9HCE3 1301 aa18.45■□□□□ 0.54
COL27A1-206ENST00000490831 A0A0G2JLL6 359 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-206ENST00000490831 CAP2P40123 477 aa18.44■□□□□ 0.54
COL27A1-206ENST00000490831 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
COL27A1-206ENST00000490831 PRRT2Q7Z6L0 340 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-206ENST00000490831 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
COL27A1-206ENST00000490831 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
COL27A1-206ENST00000490831 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
COL27A1-206ENST00000490831 MAGEB6P1A0A0J9YX57 407 aa18.43■□□□□ 0.54
COL27A1-206ENST00000490831 CAPN15O75808 1086 aa18.43■□□□□ 0.54
COL27A1-206ENST00000490831 ADD2P35612 726 aa18.43■□□□□ 0.54
COL27A1-206ENST00000490831 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-206ENST00000490831 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
COL27A1-206ENST00000490831 TLR2O60603 784 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 USP5P45974 858 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 UBE3CQ15386 1083 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 GPATCH3Q96I76 525 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL27A1-206ENST00000490831 EHD4Q9H223 541 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 PTPRFP10586 1907 aa18.42■□□□□ 0.54
COL27A1-206ENST00000490831 DDX60LQ5H9U9 1706 aaKnown RBP18.42■□□□□ 0.54
COL27A1-206ENST00000490831 MYH1P12882 1939 aa18.41■□□□□ 0.54
COL27A1-206ENST00000490831 SP3Q02447 781 aa18.41■□□□□ 0.54
COL27A1-206ENST00000490831 FASTKD5Q7L8L6 764 aaKnown RBP18.41■□□□□ 0.54
COL27A1-206ENST00000490831 ERO1AQ96HE7 468 aa18.41■□□□□ 0.54
COL27A1-206ENST00000490831 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
COL27A1-206ENST00000490831 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
COL27A1-206ENST00000490831 SAP30BPQ9UHR5 308 aaKnown RBP18.41■□□□□ 0.54
COL27A1-206ENST00000490831 ATAD5Q96QE3 1844 aa18.4■□□□□ 0.54
COL27A1-206ENST00000490831 PDHXO00330 501 aa18.4■□□□□ 0.54
COL27A1-206ENST00000490831 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-206ENST00000490831 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
COL27A1-206ENST00000490831 TTC41PQ6P2S7 1318 aa18.4■□□□□ 0.54
COL27A1-206ENST00000490831 ADGRA2Q96PE1 1338 aa18.4■□□□□ 0.54
COL27A1-206ENST00000490831 MYH7P12883 1935 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 ZSCAN25Q6NSZ9 544 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 TATDN1Q6P1N9 297 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 FBXO46Q6PJ61 603 aaPredicted RBP18.39■□□□□ 0.53
COL27A1-206ENST00000490831 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 TTC6Q86TZ1 520 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 CRACR2BQ8N4Y2 399 aaPredicted RBP18.39■□□□□ 0.53
COL27A1-206ENST00000490831 GCC1Q96CN9 775 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 SALL3Q9BXA9 1300 aa18.39■□□□□ 0.53
COL27A1-206ENST00000490831 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 ASNSP08243 561 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 JAG1P78504 1218 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 CAP1Q01518 475 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 C17orf99Q6UX52 265 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
COL27A1-206ENST00000490831 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 ZNF280CQ8ND82 737 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 CD99L2Q8TCZ2 262 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 DCP1AQ9NPI6 582 aaPredicted RBP18.38■□□□□ 0.53
COL27A1-206ENST00000490831 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 HTTP42858 3142 aa18.38■□□□□ 0.53
COL27A1-206ENST00000490831 TRIM75PA6NK02 468 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 GABPAQ06546 454 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
COL27A1-206ENST00000490831 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 TRIM34Q9BYJ4 488 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 TAOK2Q9UL54 1235 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 HPS5Q9UPZ3 1129 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
COL27A1-206ENST00000490831 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 LOC285556D6RIA3 1793 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 ERC2O15083 957 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 MBD4O95243 580 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 CHGBP05060 677 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 PLCD1P51178 756 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 SPP2Q13103 211 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-206ENST00000490831 PARK7Q99497 189 aaKnown RBP18.36■□□□□ 0.53
COL27A1-206ENST00000490831 ARMT1Q9H993 441 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 AS3MTQ9HBK9 375 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 ATP8A2Q9NTI2 1148 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 ZBTB21Q9ULJ3 1066 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
COL27A1-206ENST00000490831 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms