RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 RNFT1Q5M7Z0 435 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 IL22RA1Q8N6P7 574 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 FBXO27Q8NI29 283 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 GRIN3AQ8TCU5 1115 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 SPATA32Q96LK8 384 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 HIRIP3Q9BW71 556 aaPredicted RBP7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 FRRS1LQ9P0K9 344 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 ATP7AQ04656 1500 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 HSPA6P17066 643 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 BMP6P22004 513 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 MCM4P33991 863 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 RPS26P62854 115 aaKnown RBP7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 GSTM4Q03013 218 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 R3HDM1Q15032 1099 aaKnown RBP7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 CCDC144BQ3MJ40 725 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 HGSNATQ68CP4 663 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 LLGL2Q6P1M3 1020 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 CCDC81Q6ZN84 652 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 DDX54Q8TDD1 881 aaKnown RBP7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
SSX2IP-208ENST00000490476 PLCH2O75038 1416 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 SHANK3Q9BYB0 1731 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 SOX1O00570 391 aaPredicted RBP7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 ARNTP27540 789 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 LRRC14Q15048 493 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 FBXW10Q5XX13 1052 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 FAM196AQ6ZSG2 479 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 FAM177A1Q8N128 213 aaPredicted RBP7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 ZSWIM4Q9H7M6 989 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 KCNQ5Q9NR82 932 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 STARD13Q9Y3M8 1113 aa7.19□□□□□ -1.26
SSX2IP-208ENST00000490476 TNS2Q63HR2 1409 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 MYO5CQ9NQX4 1742 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 H3BRJ5 948 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 LINC01387J3KSC0 135 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 RBL2Q08999 1139 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 MAP1SQ66K74 1059 aaPredicted RBP7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 DIEXFQ68CQ4 756 aaKnown RBP7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 MPRIPQ6WCQ1 1025 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 KCNB2Q92953 911 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 MDFIQ99750 246 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 PPT2Q9UMR5 302 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 CYP8B1Q9UNU6 501 aa7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 KDM5AP29375 1690 aaKnown RBP7.18□□□□□ -1.26
SSX2IP-208ENST00000490476 BPNT1O95861 308 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 ALBP02768 609 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 ETFBP38117 255 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 SOX9P48436 509 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 SOGA3Q5TF21 947 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 GIMAP6Q6P9H5 292 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 GATAD2BQ8WXI9 593 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 GDF2Q9UK05 429 aaPredicted RBP7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 PPME1Q9Y570 386 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 TMEM94Q12767 1356 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 GOLGA3Q08378 1498 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 FAM135AQ9P2D6 1515 aa7.17□□□□□ -1.26
SSX2IP-208ENST00000490476 UGGT1Q9NYU2 1555 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 EPXP11678 715 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 ARL4DP49703 201 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 AFF1P51825 1210 aaKnown RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 PTPN11Q06124 597 aaPredicted RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 COL9A2Q14055 689 aaPredicted RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 BMS1Q14692 1282 aaKnown RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 CWF19L2Q2TBE0 894 aaKnown RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 TTC9Q92623 222 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 SRRTQ9BXP5 876 aaKnown RBP7.16□□□□□ -1.26
SSX2IP-208ENST00000490476 RGPD1P0DJD0 1748 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 KIDINS220Q9ULH0 1771 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 FAM221AA4D161 298 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 M0R082 166 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 LILRB5O75023 590 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 GSTP1P09211 210 aaKnown RBP7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 C19orf57Q0VDD7 668 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 AP3B2Q13367 1082 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 GRIK5Q16478 980 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 GK5Q6ZS86 529 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 SLITRK4Q8IW52 837 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 GALNT6Q8NCL4 622 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 ZNF417Q8TAU3 575 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 ACDQ96AP0 544 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 ZNF587Q96SQ5 575 aaPredicted RBP7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 OSBPL2Q9H1P3 480 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms