RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 COL2A1P02458 1487 aaPredicted RBP10.1□□□□□ -0.79
SMG5-205ENST00000489907 TRIM75PA6NK02 468 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 INHAP05111 366 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 UBXN2AP68543 259 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 JAG1P78504 1218 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 PICALMQ13492 652 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 GADL1Q6ZQY3 521 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 TBC1D9Q6ZT07 1266 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 API5Q9BZZ5 524 aaKnown RBP10.1□□□□□ -0.79
SMG5-205ENST00000489907 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 LAMA3Q16787 3333 aa10.1□□□□□ -0.79
SMG5-205ENST00000489907 ZBED9Q6R2W3 1325 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 PNMA6EA0A0J9YXQ4 647 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 FARP2O94887 1054 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 CAPN2P17655 700 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 CAP2P40123 477 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 MCAMP43121 646 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 HNRNPUQ00839 825 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG5-205ENST00000489907 SPP2Q13103 211 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 FAM110CQ1W6H9 321 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 SPTY2D1Q68D10 685 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 METTL16Q86W50 562 aaKnown RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 ZSCAN29Q8IWY8 852 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 ANKRD13CQ8N6S4 541 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 DEFB118Q96PH6 123 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 HTATIP2Q9BUP3 242 aa10.09□□□□□ -0.79
SMG5-205ENST00000489907 OSBPL5Q9H0X9 879 aaPredicted RBP10.09□□□□□ -0.79
SMG5-205ENST00000489907 SOX1O00570 391 aaPredicted RBP10.08□□□□□ -0.8
SMG5-205ENST00000489907 TNPO2O14787 897 aaKnown RBP10.08□□□□□ -0.8
SMG5-205ENST00000489907 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
SMG5-205ENST00000489907 TRIM32Q13049 653 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 MVPQ14764 893 aaKnown RBP10.08□□□□□ -0.8
SMG5-205ENST00000489907 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 ZNF280CQ8ND82 737 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 DNAJC18Q9H819 358 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMG5-205ENST00000489907 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
SMG5-205ENST00000489907 AKAP2Q9Y2D5 859 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 COL6A3P12111 3177 aa10.08□□□□□ -0.8
SMG5-205ENST00000489907 PEX10O60683 326 aa10.07□□□□□ -0.8
SMG5-205ENST00000489907 SHROOM1Q2M3G4 852 aaPredicted RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 ADGRA1Q86SQ6 560 aa10.07□□□□□ -0.8
SMG5-205ENST00000489907 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 SMCR8Q8TEV9 937 aaPredicted RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 DIS3LQ8TF46 1054 aaKnown RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 PAWRQ96IZ0 340 aaKnown RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 WDR18Q9BV38 432 aa10.07□□□□□ -0.8
SMG5-205ENST00000489907 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
SMG5-205ENST00000489907 HDAC5Q9UQL6 1122 aa10.07□□□□□ -0.8
SMG5-205ENST00000489907 DDX60LQ5H9U9 1706 aaKnown RBP10.07□□□□□ -0.8
SMG5-205ENST00000489907 MAST2Q6P0Q8 1798 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 A0A1W2PPC1 479 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 TFRCP02786 760 aaKnown RBP10.06□□□□□ -0.8
SMG5-205ENST00000489907 GNAI3P08754 354 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 HOXA7P31268 230 aaPredicted RBP10.06□□□□□ -0.8
SMG5-205ENST00000489907 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
SMG5-205ENST00000489907 HMGCS2P54868 508 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 PPP4CP60510 307 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 MAP3K21Q5TCX8 1036 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 COA7Q96BR5 231 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 NEUROD6Q96NK8 337 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 GDF15Q99988 308 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 TBC1D2Q9BYX2 928 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMG5-205ENST00000489907 TXNRD2Q9NNW7 524 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 NR2E3Q9Y5X4 410 aa10.06□□□□□ -0.8
SMG5-205ENST00000489907 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
SMG5-205ENST00000489907 LDHCP07864 332 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 TRIM27P14373 513 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 BMP8BP34820 402 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 POLA2Q14181 598 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 Q3C1V9 767 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 USP6NLQ92738 828 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 P2RX7Q99572 595 aaKnown RBP10.05□□□□□ -0.8
SMG5-205ENST00000489907 GPR108Q9NPR9 543 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 PI4KBQ9UBF8 816 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 RBPJLQ9UBG7 517 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
SMG5-205ENST00000489907 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 MYH1P12882 1939 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 FRMPD3Q5JV73 1810 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 RPTORQ8N122 1335 aa10.05□□□□□ -0.8
SMG5-205ENST00000489907 EVI5O60447 810 aa10.04□□□□□ -0.8
SMG5-205ENST00000489907 BCAR3O75815 825 aa10.04□□□□□ -0.8
SMG5-205ENST00000489907 BACE1P56817 501 aa10.04□□□□□ -0.8
SMG5-205ENST00000489907 GSTO1P78417 241 aa10.04□□□□□ -0.8
SMG5-205ENST00000489907 FOXP4Q8IVH2 680 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms