RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 RAI14Q9P0K7 980 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 HMG20BQ9P0W2 317 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 GABRQQ9UN88 632 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 AGTPBP1Q9UPW5 1226 aa11.54□□□□□ -0.56
SNX17-207ENST00000489402 COL2A1P02458 1487 aaPredicted RBP11.54□□□□□ -0.56
SNX17-207ENST00000489402 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 GNAI2P04899 355 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 ARID4AP29374 1257 aaPredicted RBP11.53□□□□□ -0.56
SNX17-207ENST00000489402 FLT3LGP49771 235 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 RHBDL3P58872 404 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
SNX17-207ENST00000489402 U2AF1L4Q8WU68 220 aaKnown RBP11.53□□□□□ -0.56
SNX17-207ENST00000489402 COA7Q96BR5 231 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 NSUN4Q96CB9 384 aaKnown RBP11.53□□□□□ -0.56
SNX17-207ENST00000489402 LRP2BPQ9P2M1 347 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
SNX17-207ENST00000489402 LOC285556D6RIA3 1793 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 CCER2I3L3R5 266 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 FARP2O94887 1054 aaPredicted RBP11.52□□□□□ -0.57
SNX17-207ENST00000489402 UQCRFS1P1P0C7P4 283 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 TRIM27P14373 513 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 CAPN2P17655 700 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX17-207ENST00000489402 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
SNX17-207ENST00000489402 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
SNX17-207ENST00000489402 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
SNX17-207ENST00000489402 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
SNX17-207ENST00000489402 PEX10O60683 326 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 SGPL1O95470 568 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 BAG3O95817 575 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 INHAP05111 366 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 ELNP15502 786 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 MCAMP43121 646 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 JAG1P78504 1218 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 SPP2Q13103 211 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
SNX17-207ENST00000489402 IRF5Q13568 498 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 FAM110CQ1W6H9 321 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 AS3MTQ9HBK9 375 aa11.51□□□□□ -0.57
SNX17-207ENST00000489402 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
SNX17-207ENST00000489402 USP17L5A8MUK1 530 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 TFRCP02786 760 aaKnown RBP11.5□□□□□ -0.57
SNX17-207ENST00000489402 PLCG2P16885 1265 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 CAP2P40123 477 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
SNX17-207ENST00000489402 HMGCS2P54868 508 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 CCDC158Q5M9N0 1113 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 UBE2Q1Q7Z7E8 422 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
SNX17-207ENST00000489402 SIPA1L1O43166 1804 aa11.5□□□□□ -0.57
SNX17-207ENST00000489402 NAA16Q6N069 864 aaPredicted RBP11.49□□□□□ -0.57
SNX17-207ENST00000489402 ADGRA1Q86SQ6 560 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 SH3RF3Q8TEJ3 882 aaPredicted RBP11.49□□□□□ -0.57
SNX17-207ENST00000489402 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
SNX17-207ENST00000489402 EVI5O60447 810 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 ASNSP08243 561 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
SNX17-207ENST00000489402 TNNI3KQ59H18 835 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
SNX17-207ENST00000489402 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
SNX17-207ENST00000489402 GPR108Q9NPR9 543 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
SNX17-207ENST00000489402 AATFQ9NY61 560 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNX17-207ENST00000489402 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 RBM27Q9P2N5 1060 aaKnown RBP11.48□□□□□ -0.57
SNX17-207ENST00000489402 FPGT-TNNI3KV9GXZ4 949 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
SNX17-207ENST00000489402 CEP290O15078 2479 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 IGSF3O75054 1194 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 HMGCRP04035 888 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 MTMR2Q13614 643 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 TGFBRAP1Q8WUH2 860 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 LAMA3Q16787 3333 aa11.47□□□□□ -0.57
SNX17-207ENST00000489402 FLT1P17948 1338 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 DNAH12Q6ZR08 3092 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
SNX17-207ENST00000489402 SURF6O75683 361 aaKnown RBP11.46□□□□□ -0.57
SNX17-207ENST00000489402 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 RLBP1P12271 317 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 BACE1P56817 501 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms