RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 GAL3ST3Q96A11 431 aa8.17□□□□□ -1.1
CTNNB1-215ENST00000488914 PLPPR2Q96GM1 343 aa8.17□□□□□ -1.1
CTNNB1-215ENST00000488914 FBRSQ9HAH7 460 aa8.17□□□□□ -1.1
CTNNB1-215ENST00000488914 VAV3Q9UKW4 847 aa8.17□□□□□ -1.1
CTNNB1-215ENST00000488914 PAPLNO95428 1278 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 FUT4P22083 530 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 GNA15P30679 374 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 PRKCQQ04759 706 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 ARHGAP27Q6ZUM4 889 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 SV2BQ7L1I2 683 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 MISP3Q96FF7 219 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 CNTNAP4Q9C0A0 1308 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 MKNK2Q9HBH9 465 aa8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 MBNL3Q9NUK0 354 aaKnown RBP8.16□□□□□ -1.1
CTNNB1-215ENST00000488914 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 EOMESO95936 686 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 RNASE1P07998 156 aaKnown RBP8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 CYFIP1Q7L576 1253 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 PCDHB5Q9Y5E4 795 aa8.15□□□□□ -1.1
CTNNB1-215ENST00000488914 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 NKG7Q16617 165 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 ARMCX6Q7L4S7 300 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 HRASLS5Q96KN8 279 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 AK5Q9Y6K8 562 aa8.14□□□□□ -1.11
CTNNB1-215ENST00000488914 TMEM265A0A087WTH1 108 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 SLITRK5O94991 958 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 SEPT6Q14141 434 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 NKPD1Q17RQ9 610 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 SCARA3Q6AZY7 606 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 OGFOD2Q6N063 350 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 SPACA3Q8IXA5 215 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 FRMD6Q96NE9 622 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
CTNNB1-215ENST00000488914 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 WIPI1Q5MNZ9 446 aaPredicted RBP8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 MEI1Q5TIA1 1274 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.115e-6■■■□□ 15.9
CTNNB1-215ENST00000488914 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 ZNF507Q8TCN5 953 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 ASIC4Q96FT7 647 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 GTF2IRD1Q9UHL9 959 aa8.12□□□□□ -1.11
CTNNB1-215ENST00000488914 PRR33A8MZF0 331 aa8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 JUNBP17275 347 aaPredicted RBP8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 HDXQ7Z353 690 aa8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 LRRN4CLQ8ND94 238 aa8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 WNT10AQ9GZT5 417 aa8.11□□□□□ -1.11
CTNNB1-215ENST00000488914 LRIG2O94898 1065 aa8.1□□□□□ -1.11
CTNNB1-215ENST00000488914 PARP2Q9UGN5 583 aa8.1□□□□□ -1.11
CTNNB1-215ENST00000488914 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
CTNNB1-215ENST00000488914 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
CTNNB1-215ENST00000488914 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.11
CTNNB1-215ENST00000488914 GFRA2O00451 464 aa8.09□□□□□ -1.11
CTNNB1-215ENST00000488914 KCT2Q8NC54 265 aa8.09□□□□□ -1.11
CTNNB1-215ENST00000488914 FAM161BQ96MY7 647 aa8.09□□□□□ -1.11
CTNNB1-215ENST00000488914 FOXQ1Q9C009 403 aa8.09□□□□□ -1.11
CTNNB1-215ENST00000488914 GRK4P32298 578 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 LIG3P49916 1009 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 ETF1P62495 437 aaKnown RBP8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 AGMOQ6ZNB7 445 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 NPAS4Q8IUM7 802 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 MIPEPQ99797 713 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 PRDM5Q9NQX1 630 aaPredicted RBP8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 SNCAIPQ9Y6H5 919 aa8.08□□□□□ -1.12
CTNNB1-215ENST00000488914 CTSHP09668 335 aa8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 TFE3P19532 575 aaPredicted RBP8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 RPS26P62854 115 aaKnown RBP8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 IKZF1Q13422 519 aa8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 ANGEL2Q5VTE6 544 aaKnown RBP8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 TLR6Q9Y2C9 796 aa8.07□□□□□ -1.12
CTNNB1-215ENST00000488914 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
CTNNB1-215ENST00000488914 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
CTNNB1-215ENST00000488914 ATG4DQ86TL0 474 aaPredicted RBP8.06□□□□□ -1.12
CTNNB1-215ENST00000488914 HSPA12BQ96MM6 686 aa8.06□□□□□ -1.12
CTNNB1-215ENST00000488914 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
CTNNB1-215ENST00000488914 F6X3S4 739 aa8.05□□□□□ -1.12
CTNNB1-215ENST00000488914 YBX3P16989 372 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■■□□□ 11.4
CTNNB1-215ENST00000488914 CAP2P40123 477 aa8.05□□□□□ -1.12
CTNNB1-215ENST00000488914 DAB2P98082 770 aa8.05□□□□□ -1.12
CTNNB1-215ENST00000488914 FGD1P98174 961 aa8.05□□□□□ -1.12
CTNNB1-215ENST00000488914 ZP2Q05996 745 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms