RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 USP5P45974 858 aa16.67■□□□□ 0.26
SH2D3C-212ENST00000488685 ZNF296Q8WUU4 475 aaPredicted RBP16.67■□□□□ 0.26
SH2D3C-212ENST00000488685 ZCCHC17Q9NP64 241 aaKnown RBP16.67■□□□□ 0.26
SH2D3C-212ENST00000488685 PICK1Q9NRD5 415 aa16.67■□□□□ 0.26
SH2D3C-212ENST00000488685 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
SH2D3C-212ENST00000488685 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 CXCL11O14625 94 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
SH2D3C-212ENST00000488685 CAP2P40123 477 aa16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 CRHR2Q13324 411 aa16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 SAP30BPQ9UHR5 308 aaKnown RBP16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 SIPA1L1O43166 1804 aa16.65■□□□□ 0.26
SH2D3C-212ENST00000488685 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 FKTNO75072 461 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 DGKZQ13574 1117 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 MOGSQ13724 837 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 RRP1BQ14684 758 aaKnown RBP16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
SH2D3C-212ENST00000488685 MYH1P12882 1939 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 CTU1Q7Z7A3 348 aaKnown RBP16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 CRACR2BQ8N4Y2 399 aaPredicted RBP16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 PI4K2BQ8TCG2 481 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 CRNKL1Q9BZJ0 848 aaKnown RBP16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 EHD4Q9H223 541 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 DNAJC18Q9H819 358 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
SH2D3C-212ENST00000488685 PHIPQ8WWQ0 1821 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 ERC2O15083 957 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 MX1P20591 662 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 ABHD8Q96I13 439 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 TBC1D2Q9BYX2 928 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 MYH7P12883 1935 aa16.62■□□□□ 0.25
SH2D3C-212ENST00000488685 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 MBD4O95243 580 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 IGHDP01880 384 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 CHGBP05060 677 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 FASTKD5Q7L8L6 764 aaKnown RBP16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 ARMT1Q9H993 441 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
SH2D3C-212ENST00000488685 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 PDHXO00330 501 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 TLR2O60603 784 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 ASNSP08243 561 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 PLCD1P51178 756 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 PKN2Q16513 984 aaKnown RBP16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 GPAT2Q6NUI2 795 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 SDR42E1Q8WUS8 393 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 ATAD5Q96QE3 1844 aa16.6■□□□□ 0.25
SH2D3C-212ENST00000488685 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 JAG1P78504 1218 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 SP3Q02447 781 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 SPP2Q13103 211 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
SH2D3C-212ENST00000488685 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 PRKAB2O43741 272 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 GABPAQ06546 454 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 APPBP2Q92624 585 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
SH2D3C-212ENST00000488685 PTPRFP10586 1907 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms