RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 BIN2Q9UBW5 565 aaPredicted RBP5.77□□□□□ -1.49
CD46-215ENST00000488596 SNX11Q9Y5W9 270 aa5.77□□□□□ -1.49
CD46-215ENST00000488596 DCDC2CA8MYV0 355 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 BMP6P22004 513 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 NKPD1Q17RQ9 610 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 TMCO4Q5TGY1 634 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 SND1Q7KZF4 910 aaKnown RBP eCLIP5.76□□□□□ -1.499e-16■■□□□ 14.3
CD46-215ENST00000488596 SPACA3Q8IXA5 215 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 C3orf58Q8NDZ4 430 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 ACSBG1Q96GR2 724 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 NECAB3Q96P71 396 aaPredicted RBP5.76□□□□□ -1.49
CD46-215ENST00000488596 EMILIN2Q9BXX0 1053 aa5.76□□□□□ -1.49
CD46-215ENST00000488596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.76□□□□□ -1.491e-19■■■□□ 17.9
CD46-215ENST00000488596 NCANO14594 1321 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 IGF2BP3O00425 579 aaKnown RBP eCLIP5.75□□□□□ -1.49
CD46-215ENST00000488596 PAGE1O75459 146 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 RING1Q06587 406 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 MESP2Q0VG99 397 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 DSC3Q14574 896 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 C12orf40Q86WS4 652 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 PRDM10Q9NQV6 1147 aa5.75□□□□□ -1.49
CD46-215ENST00000488596 PNMA6FA0A0J9YX94 578 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 ZNF503-AS2A6NEH8 195 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 PRRG2O14669 202 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 ENC1O14682 589 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 EOMESO95936 686 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 ZP2Q05996 745 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 RASIP1Q5U651 963 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 TPTE2Q6XPS3 522 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 FLAD1Q8NFF5 587 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 ASB11Q8WXH4 323 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 GTF2IRD1Q9UHL9 959 aa5.74□□□□□ -1.49
CD46-215ENST00000488596 MFAP1P55081 439 aaKnown RBP5.73□□□□□ -1.49
CD46-215ENST00000488596 PLCB3Q01970 1234 aa5.73□□□□□ -1.49
CD46-215ENST00000488596 IKZF1Q13422 519 aa5.73□□□□□ -1.49
CD46-215ENST00000488596 ENOX2Q16206 610 aaKnown RBP5.73□□□□□ -1.49
CD46-215ENST00000488596 LILRA6Q6PI73 481 aa5.73□□□□□ -1.49
CD46-215ENST00000488596 ZSWIM9Q86XI8 627 aa5.73□□□□□ -1.49
CD46-215ENST00000488596 DCTN4Q9UJW0 460 aa5.73□□□□□ -1.49
CD46-215ENST00000488596 LRRC10BA6NIK2 292 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 FANCGO15287 622 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 TREHO43280 583 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 FBXO24O75426 580 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 TRIM37O94972 964 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 ZNF865P0CJ78 1059 aaPredicted RBP5.72□□□□□ -1.49
CD46-215ENST00000488596 CCDC27Q2M243 656 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 ZBTB37Q5TC79 503 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 FYB2Q5VWT5 728 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
CD46-215ENST00000488596 CNTNAP4Q9C0A0 1308 aa5.72□□□□□ -1.49
CD46-215ENST00000488596 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.71□□□□□ -1.5
CD46-215ENST00000488596 RBAK-RBAKDNI3L0D1 243 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 KCNMB1Q16558 191 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 MLANAQ16655 118 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 CILP2Q8IUL8 1156 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 LIN37Q96GY3 246 aaPredicted RBP5.71□□□□□ -1.5
CD46-215ENST00000488596 TOX2Q96NM4 488 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 SETDB2Q96T68 719 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 OSBPL7Q9BZF2 842 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 PICK1Q9NRD5 415 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 RAPGEFL1Q9UHV5 662 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 PCDHA4Q9UN74 947 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 PITPNM2Q9BZ72 1349 aa5.71□□□□□ -1.5
CD46-215ENST00000488596 SLITRK5O94991 958 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 INPP5AQ14642 412 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 LLGL2Q6P1M3 1020 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 ARMCX6Q7L4S7 300 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 CEP44Q9C0F1 390 aa5.7□□□□□ -1.5
CD46-215ENST00000488596 GNAT3A8MTJ3 354 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 PRR33A8MZF0 331 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 B8ZZF3 427 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 GSTT1P30711 240 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 CLCN7P51798 805 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 PTPN11Q06124 597 aaPredicted RBP5.69□□□□□ -1.5
CD46-215ENST00000488596 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 SIAH1Q8IUQ4 282 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 CARS2Q9HA77 564 aaKnown RBP5.69□□□□□ -1.5
CD46-215ENST00000488596 FBRSQ9HAH7 460 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 PRDM5Q9NQX1 630 aaPredicted RBP5.69□□□□□ -1.5
CD46-215ENST00000488596 SEMA3GQ9NS98 782 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 FAM53CQ9NYF3 392 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 SAMM50Q9Y512 469 aa5.69□□□□□ -1.5
CD46-215ENST00000488596 LRIG2O94898 1065 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 MAPK1P28482 360 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 SLBPQ14493 270 aaKnown RBP eCLIP5.68□□□□□ -1.5
CD46-215ENST00000488596 LRFN4Q6PJG9 635 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 RIN3Q8TB24 985 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 ZSCAN18Q8TBC5 510 aaPredicted RBP5.68□□□□□ -1.5
CD46-215ENST00000488596 ZNF507Q8TCN5 953 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 HSPA12BQ96MM6 686 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 FOXQ1Q9C009 403 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 ATP13A1Q9HD20 1204 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 MAPK8IP1Q9UQF2 711 aa5.68□□□□□ -1.5
CD46-215ENST00000488596 PRAMEF27A3QJZ7 478 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms