RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 NR2E3Q9Y5X4 410 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 ALPK3Q96L96 1907 aa15.19■□□□□ 0.02
TTC3-221ENST00000488522 TNPO2O14787 897 aaKnown RBP15.18■□□□□ 0.02
TTC3-221ENST00000488522 INHAP05111 366 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 TIMM10P62072 90 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 MECOMQ03112 1051 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 XAGE2Q96GT9 111 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 BIN2Q9UBW5 565 aaPredicted RBP15.18■□□□□ 0.02
TTC3-221ENST00000488522 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 MAST2Q6P0Q8 1798 aa15.18■□□□□ 0.02
TTC3-221ENST00000488522 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
TTC3-221ENST00000488522 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
TTC3-221ENST00000488522 ELNP15502 786 aa15.17■□□□□ 0.02
TTC3-221ENST00000488522 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
TTC3-221ENST00000488522 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
TTC3-221ENST00000488522 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
TTC3-221ENST00000488522 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
TTC3-221ENST00000488522 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
TTC3-221ENST00000488522 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 GNAI3P08754 354 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 GCLCP48506 637 aaPredicted RBP15.16■□□□□ 0.02
TTC3-221ENST00000488522 TFCP2Q12800 502 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 PICALMQ13492 652 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 SH3D19Q5HYK7 790 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
TTC3-221ENST00000488522 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
TTC3-221ENST00000488522 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
TTC3-221ENST00000488522 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 LDHCP07864 332 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 CAP2P40123 477 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 GSTO1P78417 241 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 CCDC84Q86UT8 332 aaPredicted RBP15.15■□□□□ 0.02
TTC3-221ENST00000488522 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 ANKLE1Q8NAG6 615 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 COA7Q96BR5 231 aa15.15■□□□□ 0.02
TTC3-221ENST00000488522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
TTC3-221ENST00000488522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.15■□□□□ 0.02
TTC3-221ENST00000488522 RARSP54136 660 aaKnown RBP15.14■□□□□ 0.01
TTC3-221ENST00000488522 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
TTC3-221ENST00000488522 SPATA5Q8NB90 893 aa15.14■□□□□ 0.01
TTC3-221ENST00000488522 DEFB118Q96PH6 123 aa15.14■□□□□ 0.01
TTC3-221ENST00000488522 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
TTC3-221ENST00000488522 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
TTC3-221ENST00000488522 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
TTC3-221ENST00000488522 IGSF3O75054 1194 aa15.13■□□□□ 0.01
TTC3-221ENST00000488522 SPP2Q13103 211 aa15.13■□□□□ 0.01
TTC3-221ENST00000488522 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
TTC3-221ENST00000488522 WDR18Q9BV38 432 aa15.13■□□□□ 0.01
TTC3-221ENST00000488522 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.13■□□□□ 0.01
TTC3-221ENST00000488522 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
TTC3-221ENST00000488522 FAM196BA6NMK8 535 aa15.12■□□□□ 0.01
TTC3-221ENST00000488522 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
TTC3-221ENST00000488522 EVI5O60447 810 aa15.12■□□□□ 0.01
TTC3-221ENST00000488522 HMGCRP04035 888 aa15.12■□□□□ 0.01
TTC3-221ENST00000488522 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
TTC3-221ENST00000488522 PI16Q6UXB8 463 aa15.12■□□□□ 0.01
TTC3-221ENST00000488522 CUL9Q8IWT3 2517 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 COL6A3P12111 3177 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 ABCB7O75027 752 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 TFRCP02786 760 aaKnown RBP15.11■□□□□ 0.01
TTC3-221ENST00000488522 HOXA7P31268 230 aaPredicted RBP15.11■□□□□ 0.01
TTC3-221ENST00000488522 MCAMP43121 646 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 HMGCS2P54868 508 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 NECAB2Q7Z6G3 386 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
TTC3-221ENST00000488522 DHX36Q9H2U1 1008 aaKnown RBP15.11■□□□□ 0.01
TTC3-221ENST00000488522 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
TTC3-221ENST00000488522 DDX60LQ5H9U9 1706 aaKnown RBP15.1■□□□□ 0.01
TTC3-221ENST00000488522 UQCRFS1P1P0C7P4 283 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 BMP8BP34820 402 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
TTC3-221ENST00000488522 PPP4CP60510 307 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 TBC1D9Q6ZT07 1266 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 PAWRQ96IZ0 340 aaKnown RBP15.1■□□□□ 0.01
TTC3-221ENST00000488522 GDF15Q99988 308 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 PI4KBQ9UBF8 816 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 RPTORQ8N122 1335 aa15.1■□□□□ 0.01
TTC3-221ENST00000488522 ASNSP08243 561 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 BACE1P56817 501 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 GPR153Q6NV75 609 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 TEX11Q8IYF3 940 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 DIS3LQ8TF46 1054 aaKnown RBP15.09■□□□□ 0.01
TTC3-221ENST00000488522 NEUROD6Q96NK8 337 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 RAI14Q9P0K7 980 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 OGDHLQ9ULD0 1010 aa15.09■□□□□ 0.01
TTC3-221ENST00000488522 PNMA6EA0A0J9YXQ4 647 aa15.08■□□□□ 0
TTC3-221ENST00000488522 GNAI2P04899 355 aa15.08■□□□□ 0
TTC3-221ENST00000488522 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
TTC3-221ENST00000488522 TRIM27P14373 513 aa15.08■□□□□ 0
TTC3-221ENST00000488522 PLCG2P16885 1265 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms