RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	SLC34A2	O95436	690 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	COL2A1	P02458	1487 aa	Predicted RBP	13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PTPRF	P10586	1907 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	OSBP	P22059	807 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	DYNLL1	P63167	89 aa	Known RBP	13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	TREML2	Q5T2D2	321 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PRPF38B	Q5VTL8	546 aa	Known RBP	13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	GADL1	Q6ZQY3	521 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MAPKAPK5	Q8IW41	473 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SIRT2	Q8IXJ6	389 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ANTXR1	Q9H6X2	564 aa		13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MAST2	Q6P0Q8	1798 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	FLT1	P17948	1338 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PPP4C	P60510	307 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	KIF22	Q14807	665 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SLC4A8	Q2Y0W8	1093 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	TGFBRAP1	Q8WUH2	860 aa		13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PARK7	Q99497	189 aa	Known RBP	13.76	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MAP4K4	O95819	1239 aa	Predicted RBP	13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	CAP2	P40123	477 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PRKCZ	Q05513	592 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SPP2	Q13103	211 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ARHGEF6	Q15052	776 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MTFR1	Q15390	333 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	FASTKD5	Q7L8L6	764 aa	Known RBP	13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MIGA1	Q8NAN2	632 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	IL1RAPL2	Q9NP60	686 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SRRD	Q9UH36	339 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SAP30BP	Q9UHR5	308 aa	Known RBP	13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	GABRQ	Q9UN88	632 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	LAMA3	Q16787	3333 aa		13.75	□□□□□ -0.21
PCYT1A-215	ENST00000488235	FMNL1	O95466	1100 aa	Predicted RBP	13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	CYP7A1	P22680	504 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	AACS	Q86V21	672 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PALD1	Q9ULE6	856 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	AGTPBP1	Q9UPW5	1226 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	COG6	Q9Y2V7	657 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	CEP290	O15078	2479 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	CDK5RAP2	Q96SN8	1893 aa		13.74	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MYPN	Q86TC9	1320 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	IDH1	O75874	414 aa	Known RBP	13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	BAG3	O95817	575 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	GNRH1	P01148	92 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	HMGCS2	P54868	508 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	NBPF11	Q86T75	865 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	METTL16	Q86W50	562 aa	Known RBP	13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ZNF280C	Q8ND82	737 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SHISA4	Q96DD7	197 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	TMEM106C	Q9BVX2	250 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ZBTB40	Q9NUA8	1239 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PI4KB	Q9UBF8	816 aa		13.73	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ATAD5	Q96QE3	1844 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	APBB1	O00213	710 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PEX10	O60683	326 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	GDF11	O95390	407 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	C20orf194	Q5TEA3	1177 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	MAGEB6	Q8N7X4	407 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	NOL10	Q9BSC4	688 aa	Known RBP	13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	HERC5	Q9UII4	1024 aa	Known RBP	13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SLC45A1	Q9Y2W3	748 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	DNAH12	Q6ZR08	3092 aa		13.72	□□□□□ -0.21
PCYT1A-215	ENST00000488235	FOCAD	Q5VW36	1801 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	LOC285556	D6RIA3	1793 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	GRK4	P32298	578 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	PRMT2	P55345	433 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	FCGRT	P55899	365 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	EVX2	Q03828	476 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	ANKRD13C	Q8N6S4	541 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	RHPN1	Q8TCX5	695 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	RAET1E	Q8TD07	263 aa		13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	EDC3	Q96F86	508 aa	Known RBP	13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	DHX36	Q9H2U1	1008 aa	Known RBP	13.71	□□□□□ -0.21
PCYT1A-215	ENST00000488235	USP17L5	A8MUK1	530 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	ELN	P15502	786 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	PLCG2	P16885	1265 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	MTMR2	Q13614	643 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	SLFNL1	Q499Z3	407 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	BCL11A	Q9H165	835 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	MGAM	O43451	1857 aa		13.7	□□□□□ -0.22
PCYT1A-215	ENST00000488235	CHGB	P05060	677 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	CCL5	P13501	91 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	HOXD10	P28358	340 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	FLT3LG	P49771	235 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	SH3D19	Q5HYK7	790 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	POTEE	Q6S8J3	1075 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	ERC1	Q8IUD2	1116 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	RIOK1	Q9BRS2	568 aa	Known RBP	13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	WDR18	Q9BV38	432 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	RCAN3	Q9UKA8	241 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	ZBTB21	Q9ULJ3	1066 aa		13.69	□□□□□ -0.22
PCYT1A-215	ENST00000488235	PLCD1	P51178	756 aa		13.68	□□□□□ -0.22
PCYT1A-215	ENST00000488235	BACE1	P56817	501 aa		13.68	□□□□□ -0.22
PCYT1A-215	ENST00000488235	FAM110C	Q1W6H9	321 aa		13.68	□□□□□ -0.22
PCYT1A-215	ENST00000488235	POTED	Q86YR6	584 aa		13.68	□□□□□ -0.22
PCYT1A-215	ENST00000488235	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms