RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 PSME4Q14997 1843 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 TNKSO95271 1327 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 ZBTB43O43298 467 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 PLCG2P16885 1265 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 TGFB2P61812 414 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 WTAPQ15007 396 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 APOBEC3HQ6NTF7 200 aaKnown RBP16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 ZSCAN10Q96SZ4 725 aaPredicted RBP16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 PSMD1Q99460 953 aa16.93■□□□□ 0.3
TFAP2A-215ENST00000488193 METAP2P50579 478 aaKnown RBP eCLIP16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
TFAP2A-215ENST00000488193 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 USP17L3A6NCW0 530 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 USP17L4A6NCW7 530 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 FAM47AQ5JRC9 791 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 USP17L1Q7RTZ2 530 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 GDPD2Q9HCC8 539 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 DDX4Q9NQI0 724 aaKnown RBP16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
TFAP2A-215ENST00000488193 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 NMT2O60551 498 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 PTMSP20962 102 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 RESTQ13127 1097 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 SART3Q15020 963 aaKnown RBP16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 FAM173BQ6P4H8 233 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 CRKP46108 304 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 PDE4BQ07343 736 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 CDC42EP5Q6NZY7 148 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
TFAP2A-215ENST00000488193 POLD1P28340 1107 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 PTGER2P43116 358 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 TMEM87AQ8NBN3 555 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
TFAP2A-215ENST00000488193 ERICH2A1L162 156 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 FOSBP53539 338 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 RCAN1P53805 252 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 GJB4Q9NTQ9 266 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 FER1L6Q2WGJ9 1857 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 CPLX1O14810 134 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 GADD45BO75293 160 aaPredicted RBP16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 RASA1P20936 1047 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 GSE1Q14687 1217 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 PHKBQ93100 1093 aa16.88■□□□□ 0.29
TFAP2A-215ENST00000488193 PSDA5PKW4 1024 aaPredicted RBP16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 TFAP4Q01664 338 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 TROAPQ12815 778 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 KLHL40Q2TBA0 621 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
TFAP2A-215ENST00000488193 H3BQV1 296 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 IFNAR1P17181 557 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 CDK8P49336 464 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 NFIAQ12857 509 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 IFIT1BQ5T764 474 aaKnown RBP16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms