RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 TSG101Q99816 390 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RUFY4Q6ZNE9 571 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 PAK1Q13153 545 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 IL25Q9H293 177 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 APBA1Q02410 837 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RBL2Q08999 1139 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 KCNH5Q8NCM2 988 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 KRT23Q9C075 422 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CABP4P57796 275 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 VPS36Q86VN1 386 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SELENOOQ9BVL4 669 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SAMD15Q9P1V8 674 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 BAIAP2L1Q9UHR4 511 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 KIF1BO60333 1816 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 KIF5BP33176 963 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TBC1D8BQ0IIM8 1120 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 NUP58Q9BVL2 599 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SWAP70Q9UH65 585 aa17.15■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 AMPD3Q01432 767 aa17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 CATIPQ7Z7H3 387 aa17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 N4BP2L2Q92802 583 aaPredicted RBP17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 MTMR7Q9Y216 660 aa17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 SHROOM2Q13796 1616 aa17.14■□□□□ 0.34
HLA-DQB1-209ENST00000487676 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 LRRC45Q96CN5 670 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TACO1Q9BSH4 297 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 PPANQ9NQ55 473 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 IQCA1Q86XH1 822 aa17.14■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ZRANB2O95218 330 aaKnown RBP eCLIP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CCDC194A0A1B0GVG4 234 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ZMYND10O75800 440 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TRIM58Q8NG06 486 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 EXOC1Q9NV70 894 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KRT18P05783 430 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 IFT88Q13099 833 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ACRBPQ8NEB7 543 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 PHKBQ93100 1093 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TCP11L1Q9NUJ3 509 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 BICDL2A1A5D9 508 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ENC1O14682 589 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 VSNL1P62760 191 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CACNA2D3Q8IZS8 1091 aa17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-209ENST00000487676 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
HLA-DQB1-209ENST00000487676 AP1ARQ63HQ0 302 aa17.12■□□□□ 0.33
HLA-DQB1-209ENST00000487676 YEATS2Q9ULM3 1422 aa17.12■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ADGRG1Q9Y653 693 aa17.12■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TET3O43151 1660 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 EPHB4P54760 987 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 LACTBP83111 547 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CFAP221Q4G0U5 840 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KCND1Q9NSA2 647 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ATP7BP35670 1465 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TCP1P17987 556 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TIMM10P62072 90 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SELENOSQ9BQE4 189 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SAMSN1Q9NSI8 373 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 UBLCP1Q8WVY7 318 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 HAUS7Q99871 368 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SPATS2LQ9NUQ6 558 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms