RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 DDTLA6NHG4 134 aaPredicted RBP7.52□□□□□ -1.21
COL4A3-206ENST00000487633 ZNF853P0CG23 659 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 SHROOM1Q2M3G4 852 aaPredicted RBP7.52□□□□□ -1.21
COL4A3-206ENST00000487633 SLC39A5Q6ZMH5 540 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 FASTKD5Q7L8L6 764 aaKnown RBP7.52□□□□□ -1.21
COL4A3-206ENST00000487633 FBXO33Q7Z6M2 555 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 TEKT1Q969V4 418 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 RNPC3Q96LT9 517 aaKnown RBP7.52□□□□□ -1.21
COL4A3-206ENST00000487633 PBX4Q9BYU1 374 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 SLC45A1Q9Y2W3 748 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 HCN4Q9Y3Q4 1203 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
COL4A3-206ENST00000487633 CACNA1AO00555 2505 aa7.52□□□□□ -1.21
COL4A3-206ENST00000487633 JAG1P78504 1218 aa7.51□□□□□ -1.21
COL4A3-206ENST00000487633 FKBP1CQ5VVH2 108 aa7.51□□□□□ -1.21
COL4A3-206ENST00000487633 C16orf59Q7L2K0 433 aa7.51□□□□□ -1.21
COL4A3-206ENST00000487633 ASCC2Q9H1I8 757 aaPredicted RBP7.51□□□□□ -1.21
COL4A3-206ENST00000487633 DDX4Q9NQI0 724 aaKnown RBP7.51□□□□□ -1.21
COL4A3-206ENST00000487633 CFAP54Q96N23 3096 aa7.51□□□□□ -1.21
COL4A3-206ENST00000487633 HMGCS2P54868 508 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
COL4A3-206ENST00000487633 TMEM31Q5JXX7 168 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 MORN1Q5T089 497 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 KRT40Q6A162 431 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 FERMT2Q96AC1 680 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 TIFAQ96CG3 184 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 P2RX7Q99572 595 aaKnown RBP7.5□□□□□ -1.21
COL4A3-206ENST00000487633 SPINK5Q9NQ38 1064 aaPredicted RBP7.5□□□□□ -1.21
COL4A3-206ENST00000487633 RBPJLQ9UBG7 517 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 CHMP3Q9Y3E7 222 aa7.5□□□□□ -1.21
COL4A3-206ENST00000487633 CDK5RAP2Q96SN8 1893 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 RFX7Q2KHR2 1363 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 MYO15AQ9UKN7 3530 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 RFXAPO00287 272 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 GPR37L1O60883 481 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 ZKSCAN1P17029 563 aaPredicted RBP7.49□□□□□ -1.21
COL4A3-206ENST00000487633 IGFBP4P22692 258 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 PRDX5P30044 214 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 CYP2C19P33261 490 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 NHLH1Q02575 133 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 MAP3K10Q02779 954 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 SPP2Q13103 211 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 SNX17Q15036 470 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 AKNAD1Q5T1N1 836 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 HHIPL2Q6UWX4 724 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 LMBR1LQ6UX01 489 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 LDHAL6AQ6ZMR3 332 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL4A3-206ENST00000487633 TMOD2Q9NZR1 351 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 MORF4L1Q9UBU8 362 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 DDX20Q9UHI6 824 aaKnown RBP7.49□□□□□ -1.21
COL4A3-206ENST00000487633 YBX2Q9Y2T7 364 aaKnown RBP7.49□□□□□ -1.21
COL4A3-206ENST00000487633 DMDP11532 3685 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 DCHS1Q96JQ0 3298 aa7.49□□□□□ -1.21
COL4A3-206ENST00000487633 ZNF318Q5VUA4 2279 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 CNMDO75829 334 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 IGHA2P01877 340 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 XRCC5P13010 732 aaKnown RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 RGS3P49796 1198 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 TLE2Q04725 743 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 IFIT5Q13325 482 aaKnown RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 LRRC24Q50LG9 513 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 GPR142Q7Z601 462 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 MICALL1Q8N3F8 863 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 KAZALD1Q96I82 304 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 CNNM1Q9NRU3 951 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 BRWD1Q9NSI6 2320 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 USP40Q9NVE5 1235 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 PRKAG2Q9UGJ0 569 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
COL4A3-206ENST00000487633 TRANK1O15050 2925 aa7.48□□□□□ -1.21
COL4A3-206ENST00000487633 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 F6X3S4 739 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 DNM1LO00429 736 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 TLL1O43897 1013 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 DDX58O95786 925 aaKnown RBP7.47□□□□□ -1.21
COL4A3-206ENST00000487633 MYOGP15173 224 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 CNGA1P29973 690 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 ADCYAP1R1P41586 468 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 LMOD3Q0VAK6 560 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 PRAMEF19Q5SWL8 479 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 VGLL2Q8N8G2 317 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 LPAR1Q92633 364 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
COL4A3-206ENST00000487633 MRIQ9BWK5 157 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 NKX2-4Q9H2Z4 354 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 PICK1Q9NRD5 415 aa7.47□□□□□ -1.21
COL4A3-206ENST00000487633 EPOPA6NHQ4 379 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 SMIM22K7EJ46 135 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 MYCNP04198 464 aaPredicted RBP7.46□□□□□ -1.22
COL4A3-206ENST00000487633 ACRP10323 421 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 CYBAP13498 195 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 GCLCP48506 637 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms