RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 AKNAD1Q5T1N1 836 aa20.01■□□□□ 0.79
NF1-211ENST00000487476 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
NF1-211ENST00000487476 UPF3BQ9BZI7 483 aaKnown RBP20.01■□□□□ 0.79
NF1-211ENST00000487476 VEGFAP15692 232 aaPredicted RBP20■□□□□ 0.79
NF1-211ENST00000487476 TTC6Q86TZ1 520 aa20■□□□□ 0.79
NF1-211ENST00000487476 STAG1Q8WVM7 1258 aa20■□□□□ 0.79
NF1-211ENST00000487476 TEPSINQ96N21 525 aa20■□□□□ 0.79
NF1-211ENST00000487476 CSRNP1Q96S65 589 aa20■□□□□ 0.79
NF1-211ENST00000487476 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
NF1-211ENST00000487476 IL17RAQ96F46 866 aa20■□□□□ 0.79
NF1-211ENST00000487476 DHX36Q9H2U1 1008 aaKnown RBP20■□□□□ 0.79
NF1-211ENST00000487476 MYH1P12882 1939 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 ATRNL1Q5VV63 1379 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
NF1-211ENST00000487476 TNNI2P48788 182 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 TNFAIP1Q13829 316 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 RRP12Q5JTH9 1297 aaKnown RBP19.99■□□□□ 0.79
NF1-211ENST00000487476 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
NF1-211ENST00000487476 DNAJC18Q9H819 358 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 HLA-DOAP06340 250 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 SLC4A3P48751 1232 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 GABPAQ06546 454 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 NEK1Q96PY6 1258 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 TOMM22Q9NS69 142 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
NF1-211ENST00000487476 SCN4AP35499 1836 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 B4E1Z4 1266 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 ADM5C9JUS6 153 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 CDK8P49336 464 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 C16orf86Q6ZW13 317 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 CHST3Q7LGC8 479 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 PNMA8AQ86V59 439 aaPredicted RBP19.98■□□□□ 0.79
NF1-211ENST00000487476 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
NF1-211ENST00000487476 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 SERPINB13Q9UIV8 391 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
NF1-211ENST00000487476 ROBO3Q96MS0 1386 aa19.98■□□□□ 0.79
NF1-211ENST00000487476 KRT32Q14532 448 aa19.97■□□□□ 0.79
NF1-211ENST00000487476 MIGA2Q7L4E1 593 aa19.97■□□□□ 0.79
NF1-211ENST00000487476 CLEC11AQ9Y240 323 aa19.97■□□□□ 0.79
NF1-211ENST00000487476 FGRP09769 529 aa19.97■□□□□ 0.79
NF1-211ENST00000487476 NBPF12Q5TAG4 269 aaPredicted RBP19.97■□□□□ 0.79
NF1-211ENST00000487476 PITPNM2Q9BZ72 1349 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 KRT26Q7Z3Y9 468 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 ZC3H15Q8WU90 426 aaKnown RBP19.96■□□□□ 0.79
NF1-211ENST00000487476 ZSWIM6Q9HCJ5 1215 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 LAMA4Q16363 1823 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 KDM4AO75164 1064 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 SLC3A2P08195 630 aaKnown RBP19.96■□□□□ 0.79
NF1-211ENST00000487476 PDE4BQ07343 736 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 FAM47AQ5JRC9 791 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 USP48Q86UV5 1035 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 CRACR2BQ8N4Y2 399 aaPredicted RBP19.96■□□□□ 0.79
NF1-211ENST00000487476 MKNK2Q9HBH9 465 aa19.96■□□□□ 0.79
NF1-211ENST00000487476 COL2A1P02458 1487 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 SHMT1P34896 483 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 NCOA7Q8NI08 942 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 TM6SF1Q9BZW5 370 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 EHD4Q9H223 541 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 RNF41Q9H4P4 317 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 LAMB1P07942 1786 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 PSMA5P28066 241 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 NEK4P51957 841 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 ANTXR2P58335 489 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 TRDNQ13061 729 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 RUFY3Q7L099 469 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 RALYLQ86SE5 291 aaKnown RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 METTL16Q86W50 562 aaKnown RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 SULF1Q8IWU6 871 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 GLIS2Q9BZE0 524 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 DAXXQ9UER7 740 aaPredicted RBP19.95■□□□□ 0.78
NF1-211ENST00000487476 FZD1Q9UP38 647 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 SIPA1L1O43166 1804 aa19.95■□□□□ 0.78
NF1-211ENST00000487476 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
NF1-211ENST00000487476 RANBP6O60518 1105 aaKnown RBP19.94■□□□□ 0.78
NF1-211ENST00000487476 RASA1P20936 1047 aa19.94■□□□□ 0.78
NF1-211ENST00000487476 SHROOM1Q2M3G4 852 aaPredicted RBP19.94■□□□□ 0.78
NF1-211ENST00000487476 FOXP4Q8IVH2 680 aaPredicted RBP19.94■□□□□ 0.78
NF1-211ENST00000487476 ORC4O43929 436 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 RPS6KB1P23443 525 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 RRP1BQ14684 758 aaKnown RBP19.93■□□□□ 0.78
NF1-211ENST00000487476 KRT23Q9C075 422 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.93■□□□□ 0.787e-6■□□□□ 9.9
NF1-211ENST00000487476 CYP46A1Q9Y6A2 500 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 CD2BP2O95400 341 aaKnown RBP19.93■□□□□ 0.78
NF1-211ENST00000487476 EXOSC10Q01780 885 aaKnown RBP19.93■□□□□ 0.78
NF1-211ENST00000487476 RABEP1Q15276 862 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 ZKSCAN3Q9BRR0 538 aa19.93■□□□□ 0.78
NF1-211ENST00000487476 GPHNQ9NQX3 736 aaPredicted RBP19.93■□□□□ 0.78
NF1-211ENST00000487476 NFKBIBQ15653 356 aa19.92■□□□□ 0.78
NF1-211ENST00000487476 DHX32Q7L7V1 743 aaKnown RBP19.92■□□□□ 0.78
NF1-211ENST00000487476 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
NF1-211ENST00000487476 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms