RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 GRIK5Q16478 980 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
CDK11A-217ENST00000487462 MAP3K21Q5TCX8 1036 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 UHRF1Q96T88 793 aaPredicted RBP12.17□□□□□ -0.46
CDK11A-217ENST00000487462 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
CDK11A-217ENST00000487462 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
CDK11A-217ENST00000487462 CXCL11O14625 94 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 NOL9Q5SY16 702 aaKnown RBP12.16□□□□□ -0.46
CDK11A-217ENST00000487462 DUSP27Q5VZP5 1158 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
CDK11A-217ENST00000487462 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 ATXN2LQ8WWM7 1075 aaKnown RBP12.16□□□□□ -0.46
CDK11A-217ENST00000487462 TRIB2Q92519 343 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 C1QTNF1Q9BXJ1 281 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
CDK11A-217ENST00000487462 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
CDK11A-217ENST00000487462 GRIN2CQ14957 1233 aa12.15□□□□□ -0.46
CDK11A-217ENST00000487462 FKBP1CQ5VVH2 108 aa12.15□□□□□ -0.46
CDK11A-217ENST00000487462 SMCR8Q8TEV9 937 aaPredicted RBP12.15□□□□□ -0.46
CDK11A-217ENST00000487462 EPAS1Q99814 870 aa12.15□□□□□ -0.46
CDK11A-217ENST00000487462 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
CDK11A-217ENST00000487462 POTEMA6NI47 508 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
CDK11A-217ENST00000487462 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
CDK11A-217ENST00000487462 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
CDK11A-217ENST00000487462 DDX12PQ92771 950 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
CDK11A-217ENST00000487462 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
CDK11A-217ENST00000487462 RLFQ13129 1914 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 CSF1RP07333 972 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 FOSBP53539 338 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
CDK11A-217ENST00000487462 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
CDK11A-217ENST00000487462 PLA2G12BQ9BX93 195 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
CDK11A-217ENST00000487462 THEGQ9P2T0 379 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 LOC285556D6RIA3 1793 aa12.13□□□□□ -0.47
CDK11A-217ENST00000487462 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 H7C1W4 665 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
CDK11A-217ENST00000487462 APOBEC3HQ6NTF7 200 aaKnown RBP12.12□□□□□ -0.47
CDK11A-217ENST00000487462 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
CDK11A-217ENST00000487462 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
CDK11A-217ENST00000487462 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 CASP7P55210 303 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
CDK11A-217ENST00000487462 TRANK1O15050 2925 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 ATRNL1Q5VV63 1379 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 SEMA3EO15041 775 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 PTPRAP18433 802 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 GYG1P46976 350 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
CDK11A-217ENST00000487462 CACNB2Q08289 660 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-217ENST00000487462 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
CDK11A-217ENST00000487462 SENP6Q9GZR1 1112 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-217ENST00000487462 PHF20L1A8MW92 1017 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
CDK11A-217ENST00000487462 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-217ENST00000487462 RTP1P59025 263 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 BADQ92934 168 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-217ENST00000487462 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
CDK11A-217ENST00000487462 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 CYP2B6P20813 491 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 SCYL3Q8IZE3 742 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 EPHX3Q9H6B9 360 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 MBIPQ9NS73 344 aa12.08□□□□□ -0.48
CDK11A-217ENST00000487462 CFAP54Q96N23 3096 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms