RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RAET1EQ8TD07 263 aa14.97□□□□□ -0.01
VPS16-208ENST00000487461 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
VPS16-208ENST00000487461 AATFQ9NY61 560 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS16-208ENST00000487461 MYPNQ86TC9 1320 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 MKI67P46013 3256 aaKnown RBP14.96□□□□□ -0.01
VPS16-208ENST00000487461 BAG3O95817 575 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 GRK4P32298 578 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 FCGRTP55899 365 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 PRKCZQ05513 592 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 SPP2Q13103 211 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 TREML2Q5T2D2 321 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 EAF2Q96CJ1 260 aaPredicted RBP14.96□□□□□ -0.01
VPS16-208ENST00000487461 PIH1D3Q9NQM4 214 aaKnown RBP14.96□□□□□ -0.01
VPS16-208ENST00000487461 TLR7Q9NYK1 1049 aaKnown RBP14.96□□□□□ -0.01
VPS16-208ENST00000487461 DBNLQ9UJU6 430 aaKnown RBP14.96□□□□□ -0.01
VPS16-208ENST00000487461 GABRQQ9UN88 632 aa14.96□□□□□ -0.01
VPS16-208ENST00000487461 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 TGFBRAP1Q8WUH2 860 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 NOL10Q9BSC4 688 aaKnown RBP14.95□□□□□ -0.02
VPS16-208ENST00000487461 PI4KBQ9UBF8 816 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 AGTPBP1Q9UPW5 1226 aa14.95□□□□□ -0.02
VPS16-208ENST00000487461 RBBP6Q7Z6E9 1792 aaKnown RBP14.95□□□□□ -0.02
VPS16-208ENST00000487461 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
VPS16-208ENST00000487461 BRCA2P51587 3418 aa14.94□□□□□ -0.02
VPS16-208ENST00000487461 PLCG2P16885 1265 aa14.94□□□□□ -0.02
VPS16-208ENST00000487461 PANK1Q8TE04 598 aa14.94□□□□□ -0.02
VPS16-208ENST00000487461 DHX36Q9H2U1 1008 aaKnown RBP14.94□□□□□ -0.02
VPS16-208ENST00000487461 HERC5Q9UII4 1024 aaKnown RBP14.94□□□□□ -0.02
VPS16-208ENST00000487461 USP17L5A8MUK1 530 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 CYP7A1P22680 504 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
VPS16-208ENST00000487461 JAG1P78504 1218 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 FOXP4Q8IVH2 680 aaPredicted RBP14.93□□□□□ -0.02
VPS16-208ENST00000487461 ANKRD13CQ8N6S4 541 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 PROCA1Q8NCQ7 364 aaPredicted RBP14.93□□□□□ -0.02
VPS16-208ENST00000487461 SMCR8Q8TEV9 937 aaPredicted RBP14.93□□□□□ -0.02
VPS16-208ENST00000487461 PALD1Q9ULE6 856 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
VPS16-208ENST00000487461 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 CCL5P13501 91 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 FLT3LGP49771 235 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 HMGCS2P54868 508 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 SH3D19Q5HYK7 790 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 METTL16Q86W50 562 aaKnown RBP14.92□□□□□ -0.02
VPS16-208ENST00000487461 GCC1Q96CN9 775 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 SHISA4Q96DD7 197 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 DNAJC18Q9H819 358 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 BIN2Q9UBW5 565 aaPredicted RBP14.92□□□□□ -0.02
VPS16-208ENST00000487461 EXOC6BQ9Y2D4 811 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 DOCK1Q14185 1865 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 FLT1P17948 1338 aa14.92□□□□□ -0.02
VPS16-208ENST00000487461 ADCY3O60266 1144 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 IGSF3O75054 1194 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 GJB1P08034 283 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 SHROOM1Q2M3G4 852 aaPredicted RBP14.91□□□□□ -0.02
VPS16-208ENST00000487461 SLAIN1Q8ND83 568 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 RNF208Q9H0X6 261 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 ANTXR1Q9H6X2 564 aa14.91□□□□□ -0.02
VPS16-208ENST00000487461 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
VPS16-208ENST00000487461 PTPRFP10586 1907 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 TNPO2O14787 897 aaKnown RBP14.9□□□□□ -0.02
VPS16-208ENST00000487461 IDH1O75874 414 aaKnown RBP14.9□□□□□ -0.02
VPS16-208ENST00000487461 ELNP15502 786 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 GJA8P48165 433 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 UBXN2AP68543 259 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 HABP4Q5JVS0 413 aaKnown RBP14.9□□□□□ -0.02
VPS16-208ENST00000487461 AACSQ86V21 672 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
VPS16-208ENST00000487461 AS3MTQ9HBK9 375 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 PNMA3Q9UL41 463 aa14.9□□□□□ -0.02
VPS16-208ENST00000487461 ASNSP08243 561 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 BACE1P56817 501 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 IRF5Q13568 498 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
VPS16-208ENST00000487461 MAGEB6Q8N7X4 407 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 NKX2-3Q8TAU0 364 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 PXYLP1Q8TE99 480 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 UNC93B1Q9H1C4 597 aa14.89□□□□□ -0.03
VPS16-208ENST00000487461 GDF11O95390 407 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 GCLCP48506 637 aaPredicted RBP14.88□□□□□ -0.03
VPS16-208ENST00000487461 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS16-208ENST00000487461 MTMR2Q13614 643 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 UBE2Q1Q7Z7E8 422 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 RHPN1Q8TCX5 695 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 COA7Q96BR5 231 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
VPS16-208ENST00000487461 MYO5AQ9Y4I1 1855 aaKnown RBP14.88□□□□□ -0.03
VPS16-208ENST00000487461 MGAMO43451 1857 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 H0YGN5 161 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 INHAP05111 366 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 HLA-DOAP06340 250 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms