RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ARPP21Q9UBL0 812 aaPredicted RBP23.66■■□□□ 1.38
HPS3-206ENST00000486530 PARP3Q9Y6F1 533 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 ANKRD31Q8N7Z5 1873 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 LTBP1Q14766 1721 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 YEATS4O95619 227 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 TRIM29Q14134 588 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 GJB4Q9NTQ9 266 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 KIF28PB7ZC32 967 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 USP17L12C9JPN9 530 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 USP17L21D6R901 530 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 GSTO1P78417 241 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 PPP2R5BQ15173 497 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 SBK1Q52WX2 424 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 MSL1Q68DK7 614 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 KRT40Q6A162 431 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 KCNG4Q8TDN1 519 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 SLC26A6Q9BXS9 759 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 GGA1Q9UJY5 639 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 JAG2Q9Y219 1238 aa23.65■■□□□ 1.38
HPS3-206ENST00000486530 CYP2D7A0A087X1C5 515 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 UFL1O94874 794 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 POLR3DP05423 398 aaPredicted RBP23.64■■□□□ 1.38
HPS3-206ENST00000486530 SLC3A2P08195 630 aaKnown RBP23.64■■□□□ 1.38
HPS3-206ENST00000486530 ME1P48163 572 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 CAMK4Q16566 473 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 HS1BP3Q53T59 392 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 IQCA1Q86XH1 822 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 CCAR1Q8IX12 1150 aaKnown RBP23.64■■□□□ 1.38
HPS3-206ENST00000486530 TRIM22Q8IYM9 498 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 AIFM3Q96NN9 605 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 ZSCAN10Q96SZ4 725 aaPredicted RBP23.64■■□□□ 1.38
HPS3-206ENST00000486530 NAV1Q8NEY1 1877 aa23.64■■□□□ 1.38
HPS3-206ENST00000486530 ORC4O43929 436 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 SRGNP10124 158 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 CCDC73Q6ZRK6 1079 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 TMC4Q7Z404 712 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 LINC00301Q8NCQ3 95 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 RRAGDQ9NQL2 400 aaPredicted RBP23.64■■□□□ 1.37
HPS3-206ENST00000486530 PODXL2Q9NZ53 605 aa23.64■■□□□ 1.37
HPS3-206ENST00000486530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.64■■□□□ 1.37
HPS3-206ENST00000486530 STK38Q15208 465 aa23.63■■□□□ 1.37
HPS3-206ENST00000486530 FANCBQ8NB91 859 aa23.63■■□□□ 1.37
HPS3-206ENST00000486530 ESPNB1AK53 854 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 SMIM22K7EJ46 135 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 ENAHQ8N8S7 591 aaPredicted RBP23.62■■□□□ 1.37
HPS3-206ENST00000486530 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 A0A1W2PQ27 194 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 A0A1W2PQ64 194 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 A0A1W2PQD8 194 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 PDE6BP35913 854 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 TYRO3Q06418 890 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 ADALQ6DHV7 355 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 GPR101Q96P66 508 aaPredicted RBP23.62■■□□□ 1.37
HPS3-206ENST00000486530 CLIC4Q9Y696 253 aa23.62■■□□□ 1.37
HPS3-206ENST00000486530 CTAGE5O15320 804 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 IL1R1P14778 569 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 NPR1P16066 1061 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 NT5C2P49902 561 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 FAM160A1Q05DH4 1040 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 GNL2Q13823 731 aaKnown RBP23.61■■□□□ 1.37
HPS3-206ENST00000486530 NUP133Q8WUM0 1156 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 CD209Q9NNX6 404 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 PCDHA7Q9UN72 937 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 CDK5RAP2Q96SN8 1893 aa23.61■■□□□ 1.37
HPS3-206ENST00000486530 DEXIO95424 95 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 LDHCP07864 332 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 U2AF2P26368 475 aaKnown RBP eCLIP23.6■■□□□ 1.37
HPS3-206ENST00000486530 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 IFIT1BQ5T764 474 aaKnown RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 ANO1Q5XXA6 986 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 NBPF11Q86T75 865 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 CKAP2LQ8IYA6 745 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 GOLPH3LQ9H4A5 285 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 PPEF1O14829 653 aaPredicted RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 SPTLC2O15270 562 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 PRDM1O75626 825 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 BAG3O95817 575 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 PDE4BQ07343 736 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 CATIPQ7Z7H3 387 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 CERS3Q8IU89 383 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 CRACR2BQ8N4Y2 399 aaPredicted RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 FSIP1Q8NA03 581 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 MRPS27Q92552 414 aaKnown RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 NOL10Q9BSC4 688 aaKnown RBP23.6■■□□□ 1.37
HPS3-206ENST00000486530 POLLQ9UGP5 575 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 ATP6V0A2Q9Y487 856 aa23.6■■□□□ 1.37
HPS3-206ENST00000486530 CALM1P0DP23 149 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 CALM2P0DP24 149 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 CALM3P0DP25 149 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 FAM200AQ8TCP9 573 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 MRVI1Q9Y6F6 885 aa23.59■■□□□ 1.37
HPS3-206ENST00000486530 MROH7-TTC4A0A0A0MT08 1334 aa23.58■■□□□ 1.37
HPS3-206ENST00000486530 PPP4CP60510 307 aa23.58■■□□□ 1.37
HPS3-206ENST00000486530 SNW1Q13573 536 aaKnown RBP23.58■■□□□ 1.37
HPS3-206ENST00000486530 ENGASEQ8NFI3 743 aa23.58■■□□□ 1.37
HPS3-206ENST00000486530 RBM28Q9NW13 759 aaKnown RBP23.58■■□□□ 1.37
HPS3-206ENST00000486530 KINO60870 393 aaKnown RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms