RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
PDE6D-205ENST00000486044 RHBDL3P58872 404 aa19.99■□□□□ 0.79
PDE6D-205ENST00000486044 ANKLE1Q8NAG6 615 aa19.99■□□□□ 0.79
PDE6D-205ENST00000486044 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.99■□□□□ 0.793e-6■■□□□ 14.4
PDE6D-205ENST00000486044 HMGCRP04035 888 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 SLURP2P0DP57 97 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 CCDC84Q86UT8 332 aaPredicted RBP19.98■□□□□ 0.79
PDE6D-205ENST00000486044 SLC17A8Q8NDX2 589 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 NEUROD6Q96NK8 337 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.98■□□□□ 0.79
PDE6D-205ENST00000486044 STAP2Q9UGK3 403 aa19.98■□□□□ 0.79
PDE6D-205ENST00000486044 DOCK3Q8IZD9 2030 aa19.97■□□□□ 0.79
PDE6D-205ENST00000486044 TFCP2Q12800 502 aa19.97■□□□□ 0.79
PDE6D-205ENST00000486044 AS3MTQ9HBK9 375 aa19.97■□□□□ 0.79
PDE6D-205ENST00000486044 HMX1Q9NP08 348 aaPredicted RBP19.97■□□□□ 0.79
PDE6D-205ENST00000486044 RPTORQ8N122 1335 aa19.97■□□□□ 0.79
PDE6D-205ENST00000486044 FAM196BA6NMK8 535 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 USP17L5A8MUK1 530 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 GNAI3P08754 354 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 CAP2P40123 477 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 HMGCS2P54868 508 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 SPATA5Q8NB90 893 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 MEIS3Q99687 375 aa19.96■□□□□ 0.79
PDE6D-205ENST00000486044 NOL10Q9BSC4 688 aaKnown RBP19.96■□□□□ 0.79
PDE6D-205ENST00000486044 HERC5Q9UII4 1024 aaKnown RBP19.96■□□□□ 0.79
PDE6D-205ENST00000486044 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
PDE6D-205ENST00000486044 NSUN4Q96CB9 384 aaKnown RBP19.95■□□□□ 0.78
PDE6D-205ENST00000486044 CDCA7LQ96GN5 454 aa19.95■□□□□ 0.78
PDE6D-205ENST00000486044 NBPF3Q9H094 633 aa19.95■□□□□ 0.78
PDE6D-205ENST00000486044 ASCC2Q9H1I8 757 aaPredicted RBP19.95■□□□□ 0.78
PDE6D-205ENST00000486044 RAI14Q9P0K7 980 aa19.95■□□□□ 0.78
PDE6D-205ENST00000486044 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
PDE6D-205ENST00000486044 BMP8BP34820 402 aa19.94■□□□□ 0.78
PDE6D-205ENST00000486044 SH3D19Q5HYK7 790 aa19.94■□□□□ 0.78
PDE6D-205ENST00000486044 PI4KBQ9UBF8 816 aa19.94■□□□□ 0.78
PDE6D-205ENST00000486044 GJD2Q9UKL4 321 aa19.94■□□□□ 0.78
PDE6D-205ENST00000486044 IRX3P78415 501 aaPredicted RBP19.93■□□□□ 0.78
PDE6D-205ENST00000486044 MTX1Q13505 466 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 TEX11Q8IYF3 940 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 C7orf61Q8IZ16 206 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 TRMT2AQ8IZ69 625 aaKnown RBP19.93■□□□□ 0.78
PDE6D-205ENST00000486044 DIS3LQ8TF46 1054 aaKnown RBP19.93■□□□□ 0.78
PDE6D-205ENST00000486044 ZNF384Q8TF68 577 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 DHX36Q9H2U1 1008 aaKnown RBP19.93■□□□□ 0.78
PDE6D-205ENST00000486044 TMOD4Q9NZQ9 345 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 LOC285556D6RIA3 1793 aa19.93■□□□□ 0.78
PDE6D-205ENST00000486044 DLL1O00548 723 aa19.92■□□□□ 0.78
PDE6D-205ENST00000486044 TBC1D9Q6ZT07 1266 aa19.92■□□□□ 0.78
PDE6D-205ENST00000486044 GDF15Q99988 308 aa19.92■□□□□ 0.78
PDE6D-205ENST00000486044 MORF4L1Q9UBU8 362 aa19.92■□□□□ 0.78
PDE6D-205ENST00000486044 SOX1O00570 391 aaPredicted RBP19.91■□□□□ 0.78
PDE6D-205ENST00000486044 BAG3O95817 575 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 ASNSP08243 561 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 UQCRFS1P1P0C7P4 283 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 GPR153Q6NV75 609 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 ARHGAP45Q92619 1136 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 LRCH3Q96II8 777 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 WDR18Q9BV38 432 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 C11orf49Q9H6J7 331 aa19.91■□□□□ 0.78
PDE6D-205ENST00000486044 ATAD5Q96QE3 1844 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 C19orf81C9J6K1 198 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 PLCG2P16885 1265 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 ARID4AP29374 1257 aaPredicted RBP19.9■□□□□ 0.78
PDE6D-205ENST00000486044 HOXA7P31268 230 aaPredicted RBP19.9■□□□□ 0.78
PDE6D-205ENST00000486044 BACE1P56817 501 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 PI16Q6UXB8 463 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 CCAR1Q8IX12 1150 aaKnown RBP19.9■□□□□ 0.78
PDE6D-205ENST00000486044 TRMT44Q8IYL2 757 aaKnown RBP19.9■□□□□ 0.78
PDE6D-205ENST00000486044 GPRC5AQ8NFJ5 357 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 SOCS4Q8WXH5 440 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 NUDT12Q9BQG2 462 aa19.9■□□□□ 0.78
PDE6D-205ENST00000486044 XRCC5P13010 732 aaKnown RBP19.89■□□□□ 0.77
PDE6D-205ENST00000486044 G3BP1Q13283 466 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDE6D-205ENST00000486044 MTMR2Q13614 643 aa19.89■□□□□ 0.77
PDE6D-205ENST00000486044 FOXP4Q8IVH2 680 aaPredicted RBP19.89■□□□□ 0.77
PDE6D-205ENST00000486044 TRIM34Q9BYJ4 488 aa19.89■□□□□ 0.77
PDE6D-205ENST00000486044 GINM1Q9NU53 330 aa19.89■□□□□ 0.77
PDE6D-205ENST00000486044 OGDHLQ9ULD0 1010 aa19.89■□□□□ 0.77
PDE6D-205ENST00000486044 ZMYND8Q9ULU4 1186 aaPredicted RBP19.89■□□□□ 0.77
PDE6D-205ENST00000486044 CYP2B6P20813 491 aa19.88■□□□□ 0.77
PDE6D-205ENST00000486044 PDE3AQ14432 1141 aa19.88■□□□□ 0.77
PDE6D-205ENST00000486044 RRP1BQ14684 758 aaKnown RBP19.88■□□□□ 0.77
PDE6D-205ENST00000486044 CRACR2BQ8N4Y2 399 aaPredicted RBP19.88■□□□□ 0.77
PDE6D-205ENST00000486044 SH3RF3Q8TEJ3 882 aaPredicted RBP19.88■□□□□ 0.77
PDE6D-205ENST00000486044 TRIB2Q92519 343 aa19.88■□□□□ 0.77
PDE6D-205ENST00000486044 ALPK3Q96L96 1907 aa19.88■□□□□ 0.77
PDE6D-205ENST00000486044 MAPK4P31152 587 aa19.87■□□□□ 0.77
PDE6D-205ENST00000486044 MCAMP43121 646 aa19.87■□□□□ 0.77
PDE6D-205ENST00000486044 HERVK_113P62684 666 aa19.87■□□□□ 0.77
PDE6D-205ENST00000486044 TRIM32Q13049 653 aa19.87■□□□□ 0.77
PDE6D-205ENST00000486044 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
PDE6D-205ENST00000486044 NAA16Q6N069 864 aaPredicted RBP19.87■□□□□ 0.77
PDE6D-205ENST00000486044 P2RX7Q99572 595 aaKnown RBP19.87■□□□□ 0.77
PDE6D-205ENST00000486044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.87■□□□□ 0.77
PDE6D-205ENST00000486044 USP17L10C9JJH3 530 aa19.86■□□□□ 0.77
PDE6D-205ENST00000486044 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
PDE6D-205ENST00000486044 GNAI2P04899 355 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms