RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 DHX36Q9H2U1 1008 aaKnown RBP23.75■■□□□ 1.39
SNX5-213ENST00000486039 PICK1Q9NRD5 415 aa23.75■■□□□ 1.39
SNX5-213ENST00000486039 PI4KBQ9UBF8 816 aa23.75■■□□□ 1.39
SNX5-213ENST00000486039 PDE6AP16499 860 aa23.74■■□□□ 1.39
SNX5-213ENST00000486039 TAF1CQ15572 869 aaPredicted RBP23.74■■□□□ 1.39
SNX5-213ENST00000486039 SLC9C2Q5TAH2 1124 aa23.74■■□□□ 1.39
SNX5-213ENST00000486039 HAUS7Q99871 368 aa23.74■■□□□ 1.39
SNX5-213ENST00000486039 RIOK1Q9BRS2 568 aaKnown RBP23.74■■□□□ 1.39
SNX5-213ENST00000486039 PAG1Q9NWQ8 432 aa23.74■■□□□ 1.39
SNX5-213ENST00000486039 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.74■■□□□ 1.39
SNX5-213ENST00000486039 ZHX2Q9Y6X8 837 aa23.74■■□□□ 1.39
SNX5-213ENST00000486039 MOGSQ13724 837 aa23.73■■□□□ 1.39
SNX5-213ENST00000486039 RRP1BQ14684 758 aaKnown RBP23.73■■□□□ 1.39
SNX5-213ENST00000486039 CERS3Q8IU89 383 aa23.73■■□□□ 1.39
SNX5-213ENST00000486039 ZFYVE28Q9HCC9 887 aa23.73■■□□□ 1.39
SNX5-213ENST00000486039 PALD1Q9ULE6 856 aa23.73■■□□□ 1.39
SNX5-213ENST00000486039 CDK5RAP2Q96SN8 1893 aa23.73■■□□□ 1.39
SNX5-213ENST00000486039 TCRBV5S4A2TA0A5A2 114 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 CXCL11O14625 94 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 EFCC1Q9HA90 598 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 ZCCHC17Q9NP64 241 aaKnown RBP23.72■■□□□ 1.39
SNX5-213ENST00000486039 SAP30BPQ9UHR5 308 aaKnown RBP23.72■■□□□ 1.39
SNX5-213ENST00000486039 HERC5Q9UII4 1024 aaKnown RBP23.72■■□□□ 1.39
SNX5-213ENST00000486039 PTPN22Q9Y2R2 807 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 AFG3L2Q9Y4W6 797 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 ZNF532Q9HCE3 1301 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 FOCADQ5VW36 1801 aa23.72■■□□□ 1.39
SNX5-213ENST00000486039 SIPA1L1O43166 1804 aa23.71■■□□□ 1.39
SNX5-213ENST00000486039 CCDC84Q86UT8 332 aaPredicted RBP23.71■■□□□ 1.39
SNX5-213ENST00000486039 METTL16Q86W50 562 aaKnown RBP23.71■■□□□ 1.39
SNX5-213ENST00000486039 DNAJC18Q9H819 358 aa23.71■■□□□ 1.39
SNX5-213ENST00000486039 MAGEB6P1A0A0J9YX57 407 aa23.7■■□□□ 1.38
SNX5-213ENST00000486039 USP5P45974 858 aa23.7■■□□□ 1.38
SNX5-213ENST00000486039 SLFNL1Q499Z3 407 aa23.7■■□□□ 1.38
SNX5-213ENST00000486039 ANKRD23Q86SG2 305 aa23.7■■□□□ 1.38
SNX5-213ENST00000486039 FOXP4Q8IVH2 680 aaPredicted RBP23.7■■□□□ 1.38
SNX5-213ENST00000486039 ECHDC1Q9NTX5 307 aa23.7■■□□□ 1.38
SNX5-213ENST00000486039 DOCK1Q14185 1865 aa23.69■■□□□ 1.38
SNX5-213ENST00000486039 CAP2P40123 477 aa23.69■■□□□ 1.38
SNX5-213ENST00000486039 CAP1Q01518 475 aa23.69■■□□□ 1.38
SNX5-213ENST00000486039 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
SNX5-213ENST00000486039 A0A0G2JLL6 359 aaPredicted RBP23.68■■□□□ 1.38
SNX5-213ENST00000486039 CHGBP05060 677 aa23.68■■□□□ 1.38
SNX5-213ENST00000486039 ADD2P35612 726 aa23.68■■□□□ 1.38
SNX5-213ENST00000486039 GPAT2Q6NUI2 795 aa23.68■■□□□ 1.38
SNX5-213ENST00000486039 PRRT2Q7Z6L0 340 aaPredicted RBP23.68■■□□□ 1.38
SNX5-213ENST00000486039 PDHXO00330 501 aa23.67■■□□□ 1.38
SNX5-213ENST00000486039 TLR2O60603 784 aa23.67■■□□□ 1.38
SNX5-213ENST00000486039 HLA-DOAP06340 250 aa23.67■■□□□ 1.38
SNX5-213ENST00000486039 ARHGEF6Q15052 776 aa23.67■■□□□ 1.38
SNX5-213ENST00000486039 TSHZ3Q63HK5 1081 aa23.67■■□□□ 1.38
SNX5-213ENST00000486039 TRIM75PA6NK02 468 aa23.66■■□□□ 1.38
SNX5-213ENST00000486039 JAG1P78504 1218 aa23.66■■□□□ 1.38
SNX5-213ENST00000486039 LCORLQ8N3X6 602 aa23.66■■□□□ 1.38
SNX5-213ENST00000486039 CRACR2BQ8N4Y2 399 aaPredicted RBP23.66■■□□□ 1.38
SNX5-213ENST00000486039 PHIPQ8WWQ0 1821 aa23.66■■□□□ 1.38
SNX5-213ENST00000486039 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNX5-213ENST00000486039 SHROOM1Q2M3G4 852 aaPredicted RBP23.64■■□□□ 1.37
SNX5-213ENST00000486039 FASTKD5Q7L8L6 764 aaKnown RBP23.64■■□□□ 1.37
SNX5-213ENST00000486039 OTUD7AQ8TE49 926 aaPredicted RBP23.64■■□□□ 1.37
SNX5-213ENST00000486039 GPATCH3Q96I76 525 aa23.64■■□□□ 1.37
SNX5-213ENST00000486039 TRIM34Q9BYJ4 488 aa23.64■■□□□ 1.37
SNX5-213ENST00000486039 CRNKL1Q9BZJ0 848 aaKnown RBP23.64■■□□□ 1.37
SNX5-213ENST00000486039 ARMT1Q9H993 441 aa23.64■■□□□ 1.37
SNX5-213ENST00000486039 PDE4DIPQ5VU43 2346 aa23.64■■□□□ 1.37
SNX5-213ENST00000486039 ADGRA2Q96PE1 1338 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 PLCD1P51178 756 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 SPP2Q13103 211 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 HDAC1Q13547 482 aaPredicted RBP23.63■■□□□ 1.37
SNX5-213ENST00000486039 UBE3CQ15386 1083 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 C17orf99Q6UX52 265 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 GADL1Q6ZQY3 521 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 ZNF280CQ8ND82 737 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 SDR42E1Q8WUS8 393 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 ARMC5Q96C12 935 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 EHD4Q9H223 541 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 HTTP42858 3142 aa23.63■■□□□ 1.37
SNX5-213ENST00000486039 USP17L5A8MUK1 530 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 GDF11O95390 407 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 TTC6Q86TZ1 520 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 DCP1AQ9NPI6 582 aaPredicted RBP23.62■■□□□ 1.37
SNX5-213ENST00000486039 CPA4Q9UI42 421 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 SERPINB13Q9UIV8 391 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 MYH1P12882 1939 aa23.62■■□□□ 1.37
SNX5-213ENST00000486039 MBD4O95243 580 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 CYP2C8P10632 490 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 EVX2Q03828 476 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 TATDN1Q6P1N9 297 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 TBC1D2Q9BYX2 928 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 ATAD5Q96QE3 1844 aa23.61■■□□□ 1.37
SNX5-213ENST00000486039 TTC41PQ6P2S7 1318 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 DDX60LQ5H9U9 1706 aaKnown RBP23.6■■□□□ 1.37
SNX5-213ENST00000486039 POTEFA5A3E0 1075 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 PRKAB2O43741 272 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 POLR3DP05423 398 aaPredicted RBP23.6■■□□□ 1.37
SNX5-213ENST00000486039 ASNSP08243 561 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 AAMPQ13685 434 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 KIF22Q14807 665 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 ZSCAN25Q6NSZ9 544 aa23.6■■□□□ 1.37
SNX5-213ENST00000486039 KBTBD3Q8NAB2 608 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms