RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MED23Q9ULK4 1368 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 YDJCA8MPS7 323 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 RAD17O75943 681 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 OATP04181 439 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 LMNB1P20700 586 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 RGS3P49796 1198 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 NUCB1Q02818 461 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 KIAA2012Q0VF49 1180 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 CCDC158Q5M9N0 1113 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 ZNF804AQ7Z570 1209 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 CHD1LQ86WJ1 897 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 EHBP1Q8NDI1 1231 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 JDP2Q8WYK2 163 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 FAM84BQ96KN1 310 aaPredicted RBP6.88□□□□□ -1.31
COPS3-208ENST00000486032 RTFDC1Q9BY42 306 aaPredicted RBP6.88□□□□□ -1.31
COPS3-208ENST00000486032 CD209Q9NNX6 404 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 SNRKQ9NRH2 765 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 DBNLQ9UJU6 430 aaKnown RBP6.88□□□□□ -1.31
COPS3-208ENST00000486032 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 NDUFB9Q9Y6M9 179 aa6.88□□□□□ -1.31
COPS3-208ENST00000486032 WDR90Q96KV7 1748 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 LTBP3Q9NS15 1303 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 DDNO94850 711 aaPredicted RBP6.87□□□□□ -1.31
COPS3-208ENST00000486032 MAP4K4O95819 1239 aaPredicted RBP6.87□□□□□ -1.31
COPS3-208ENST00000486032 EIF6P56537 245 aaKnown RBP6.87□□□□□ -1.31
COPS3-208ENST00000486032 GTF2IP78347 998 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 PXYLP1Q8TE99 480 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 DNAJC2Q99543 621 aaKnown RBP6.87□□□□□ -1.31
COPS3-208ENST00000486032 MXD3Q9BW11 206 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 COA1Q9GZY4 146 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 BOLA2Q9H3K6 86 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
COPS3-208ENST00000486032 GNL3LQ9NVN8 582 aaKnown RBP6.87□□□□□ -1.31
COPS3-208ENST00000486032 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
COPS3-208ENST00000486032 MAN1A2O60476 641 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 DXOO77932 396 aaKnown RBP6.86□□□□□ -1.31
COPS3-208ENST00000486032 UQCRFS1P1P0C7P4 283 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 MX1P20591 662 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 TTLL5Q6EMB2 1281 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 FBXO33Q7Z6M2 555 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 ABCF2Q9UG63 623 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 ZNRF3Q9ULT6 936 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 ADAMTSL1Q8N6G6 1762 aa6.86□□□□□ -1.31
COPS3-208ENST00000486032 IRS2Q9Y4H2 1338 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 PSMD14O00487 310 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 MCAMP43121 646 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 ZAP70P43403 619 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 HTRA3P83110 453 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 FMR1Q06787 632 aaKnown RBP eCLIP6.85□□□□□ -1.31
COPS3-208ENST00000486032 CXCL9Q07325 125 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 Q3C1V9 767 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 CIAPIN1Q6FI81 312 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 DLK2Q6UY11 383 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 C15orf52Q6ZUT6 534 aaKnown RBP6.85□□□□□ -1.31
COPS3-208ENST00000486032 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 PODNQ7Z5L7 613 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 TDRD7Q8NHU6 1098 aaKnown RBP6.85□□□□□ -1.31
COPS3-208ENST00000486032 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 EDC3Q96F86 508 aaKnown RBP6.85□□□□□ -1.31
COPS3-208ENST00000486032 VPS33BQ9H267 617 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 GPBP1L1Q9HC44 474 aaPredicted RBP6.85□□□□□ -1.31
COPS3-208ENST00000486032 ECHDC1Q9NTX5 307 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 HMG20BQ9P0W2 317 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 DENND2AQ9ULE3 1009 aa6.85□□□□□ -1.31
COPS3-208ENST00000486032 ARAP2Q8WZ64 1704 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 FZD9O00144 591 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 GOLIM4O00461 696 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 ERC2O15083 957 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 EGFRP00533 1210 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 IL1R1P14778 569 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 ARID4AP29374 1257 aaPredicted RBP6.84□□□□□ -1.31
COPS3-208ENST00000486032 GCGRP47871 477 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 PDE1AP54750 535 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 TNIP1Q15025 636 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 PLEKHM2Q8IWE5 1019 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 GPR161Q8N6U8 529 aaKnown RBP6.84□□□□□ -1.31
COPS3-208ENST00000486032 SPATA5Q8NB90 893 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 RAI14Q9P0K7 980 aa6.84□□□□□ -1.31
COPS3-208ENST00000486032 MYH13Q9UKX3 1938 aa6.84□□□□□ -1.32
COPS3-208ENST00000486032 PSME4Q14997 1843 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 ASTN2O75129 1339 aaPredicted RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 TTC41PQ6P2S7 1318 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 GLTPD2A6NH11 291 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 IDH1O75874 414 aaKnown RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 CYP2E1P05181 493 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms