RNA–Protein interactions for RNA: ENST00000486022.1

LSMEM1-205, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-205ENST00000486022 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.13□□□□□ -1.27
LSMEM1-205ENST00000486022 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
LSMEM1-205ENST00000486022 PICK1Q9NRD5 415 aa7.13□□□□□ -1.27
LSMEM1-205ENST00000486022 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
LSMEM1-205ENST00000486022 CYP8B1Q9UNU6 501 aa7.13□□□□□ -1.27
LSMEM1-205ENST00000486022 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 CEACAM5P06731 702 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 IFI16Q16666 785 aaKnown RBP7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 STK11IPQ8N1F8 1099 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 MISP3Q96FF7 219 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 ADAMTS6Q9UKP5 1117 aa7.12□□□□□ -1.27
LSMEM1-205ENST00000486022 FANCGO15287 622 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 PAPLNO95428 1278 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 EOMESO95936 686 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 FUT4P22083 530 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 ELMO3Q96BJ8 720 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 PLPPR2Q96GM1 343 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 MKNK2Q9HBH9 465 aa7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
LSMEM1-205ENST00000486022 PRAMEF27A3QJZ7 478 aa7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 CYFIP1Q7L576 1253 aa7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 GAL3ST3Q96A11 431 aa7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 TNKS2Q9H2K2 1166 aa7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 PCDHB5Q9Y5E4 795 aa7.1□□□□□ -1.27
LSMEM1-205ENST00000486022 TMEM265A0A087WTH1 108 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 ANKRD33BA6NCL7 494 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 EIF4BP23588 611 aaKnown RBP7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 GNA15P30679 374 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 NKG7Q16617 165 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 TTBK2Q6IQ55 1244 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 OGFOD2Q6N063 350 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 SV2BQ7L1I2 683 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 CDC37L1Q7L3B6 337 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 ASIC4Q96FT7 647 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 HRASLS5Q96KN8 279 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 DUSP9Q99956 384 aaKnown RBP7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 PRDM7Q9NQW5 492 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 AK5Q9Y6K8 562 aa7.09□□□□□ -1.27
LSMEM1-205ENST00000486022 CARMIL2Q6F5E8 1435 aa7.09□□□□□ -1.28
LSMEM1-205ENST00000486022 PRPF40AO75400 957 aaKnown RBP7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 SLITRK5O94991 958 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 JUNBP17275 347 aaPredicted RBP7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 NKPD1Q17RQ9 610 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 SCARA3Q6AZY7 606 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 ARMCX6Q7L4S7 300 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 SPACA3Q8IXA5 215 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 RIN3Q8TB24 985 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 EIF4G1Q04637 1599 aaKnown RBP7.08□□□□□ -1.28
LSMEM1-205ENST00000486022 IGF2BP3O00425 579 aaKnown RBP eCLIP7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 SEPT6Q14141 434 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 MAP3K11Q16584 847 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 LRRN4CLQ8ND94 238 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 PI4K2BQ8TCG2 481 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 FRMD6Q96NE9 622 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 RC3H2Q9HBD1 1191 aaKnown RBP7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 CC2D2AQ9P2K1 1620 aa7.07□□□□□ -1.28
LSMEM1-205ENST00000486022 CECR2Q9BXF3 1484 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 PRR33A8MZF0 331 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 LRIG2O94898 1065 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 CCDC85BQ15834 202 aaPredicted RBP7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 HDXQ7Z353 690 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 AEBP1Q8IUX7 1158 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 WNT10AQ9GZT5 417 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 SNX11Q9Y5W9 270 aa7.06□□□□□ -1.28
LSMEM1-205ENST00000486022 WIPI1Q5MNZ9 446 aaPredicted RBP7.05□□□□□ -1.28
LSMEM1-205ENST00000486022 KCT2Q8NC54 265 aa7.05□□□□□ -1.28
LSMEM1-205ENST00000486022 GFRA2O00451 464 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 YBX3P16989 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 ETF1P62495 437 aaKnown RBP7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 XAGE3Q8WTP9 111 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 MIPEPQ99797 713 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 FOXQ1Q9C009 403 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
LSMEM1-205ENST00000486022 GRK4P32298 578 aa7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 IKZF1Q13422 519 aa7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 ANGEL2Q5VTE6 544 aaKnown RBP7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 AGMOQ6ZNB7 445 aa7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 ATG4DQ86TL0 474 aaPredicted RBP7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 FAM161BQ96MY7 647 aa7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 PRDM5Q9NQX1 630 aaPredicted RBP7.03□□□□□ -1.28
LSMEM1-205ENST00000486022 GNAT3A8MTJ3 354 aa7.02□□□□□ -1.29
LSMEM1-205ENST00000486022 TFE3P19532 575 aaPredicted RBP7.02□□□□□ -1.29
LSMEM1-205ENST00000486022 LIG3P49916 1009 aa7.02□□□□□ -1.29
LSMEM1-205ENST00000486022 RPS26P62854 115 aaKnown RBP7.02□□□□□ -1.29
LSMEM1-205ENST00000486022 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
LSMEM1-205ENST00000486022 ZP2Q05996 745 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms