RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ATRNL1Q5VV63 1379 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 ENTPD3O75355 529 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 PSMA5P28066 241 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 PLCD1P51178 756 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 NEK4P51957 841 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 GABPAQ06546 454 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 NBPF9Q3BBW0 867 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 SH3BP5LQ7L8J4 393 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
SND1-212ENST00000485871 ALDH8A1Q9H2A2 487 aaPredicted RBP13.41□□□□□ -0.26
SND1-212ENST00000485871 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
SND1-212ENST00000485871 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
SND1-212ENST00000485871 PCP11498 1178 aaKnown RBP13.4□□□□□ -0.26
SND1-212ENST00000485871 EPS15P42566 896 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 ANTXR2P58335 489 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 PICALMQ13492 652 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 NCOA7Q8NI08 942 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 PGAP2Q9UHJ9 254 aa13.4□□□□□ -0.26
SND1-212ENST00000485871 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 ORC4O43929 436 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
SND1-212ENST00000485871 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
SND1-212ENST00000485871 AK2P54819 239 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 TOB2Q14106 344 aaPredicted RBP13.39□□□□□ -0.27
SND1-212ENST00000485871 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 CYB5R4Q7L1T6 521 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SND1-212ENST00000485871 FAM83AQ86UY5 434 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
SND1-212ENST00000485871 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
SND1-212ENST00000485871 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
SND1-212ENST00000485871 B4E1Z4 1266 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 H7C1D1 291 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
SND1-212ENST00000485871 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
SND1-212ENST00000485871 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 METTL16Q86W50 562 aaKnown RBP13.38□□□□□ -0.27
SND1-212ENST00000485871 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 DYNLL2Q96FJ2 89 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 EHD4Q9H223 541 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
SND1-212ENST00000485871 CNNM2Q9H8M5 875 aa13.38□□□□□ -0.27
SND1-212ENST00000485871 ATAD5Q96QE3 1844 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 POTECB2RU33 542 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 ST18O60284 1047 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 TCP10Q12799 353 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
SND1-212ENST00000485871 TTC6Q86TZ1 520 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 FAM151AQ8WW52 585 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 KRT23Q9C075 422 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
SND1-212ENST00000485871 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 ZSWIM5Q9P217 1185 aa13.37□□□□□ -0.27
SND1-212ENST00000485871 PAPPA2Q9BXP8 1791 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 PRC1O43663 620 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 MYO1BO43795 1136 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 KDM4AO75164 1064 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 NT5C2P49902 561 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 LBX1P52954 281 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 TRDNQ13061 729 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 RALYLQ86SE5 291 aaKnown RBP13.36□□□□□ -0.27
SND1-212ENST00000485871 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
SND1-212ENST00000485871 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
SND1-212ENST00000485871 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
SND1-212ENST00000485871 PRDM1O75626 825 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
SND1-212ENST00000485871 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 RASA1P20936 1047 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 MCM5P33992 734 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 SHMT1P34896 483 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 CDK8P49336 464 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 MCM2P49736 904 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 EVCP57679 992 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 PDE4BQ07343 736 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 Q6ZUG5 572 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms