RNA–Protein interactions for RNA: ENST00000485804.5

SPIN1-206, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-206ENST00000485804 ATF7IPQ6VMQ6 1270 aa23.29■■□□□ 1.32
SPIN1-206ENST00000485804 DOCK3Q8IZD9 2030 aa23.29■■□□□ 1.32
SPIN1-206ENST00000485804 SPATA5Q8NB90 893 aa23.29■■□□□ 1.32
SPIN1-206ENST00000485804 OSBPL5Q9H0X9 879 aaPredicted RBP23.29■■□□□ 1.32
SPIN1-206ENST00000485804 HMG20BQ9P0W2 317 aa23.29■■□□□ 1.32
SPIN1-206ENST00000485804 ATAD5Q96QE3 1844 aa23.29■■□□□ 1.32
SPIN1-206ENST00000485804 TRIOBPQ9H2D6 2365 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 TBC1D12O60347 775 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 PABPC4Q13310 644 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPIN1-206ENST00000485804 IRF5Q13568 498 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 PI16Q6UXB8 463 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 UBE2Q1Q7Z7E8 422 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
SPIN1-206ENST00000485804 G3BP1Q13283 466 aaKnown RBP eCLIP23.27■■□□□ 1.32
SPIN1-206ENST00000485804 TEX11Q8IYF3 940 aa23.27■■□□□ 1.32
SPIN1-206ENST00000485804 PROCA1Q8NCQ7 364 aaPredicted RBP23.27■■□□□ 1.32
SPIN1-206ENST00000485804 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
SPIN1-206ENST00000485804 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
SPIN1-206ENST00000485804 HMGCS2P54868 508 aa23.26■■□□□ 1.31
SPIN1-206ENST00000485804 FAM110CQ1W6H9 321 aa23.26■■□□□ 1.31
SPIN1-206ENST00000485804 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
SPIN1-206ENST00000485804 MAP4K4O95819 1239 aaPredicted RBP23.25■■□□□ 1.31
SPIN1-206ENST00000485804 ZNF384Q8TF68 577 aa23.25■■□□□ 1.31
SPIN1-206ENST00000485804 AS3MTQ9HBK9 375 aa23.25■■□□□ 1.31
SPIN1-206ENST00000485804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.25■■□□□ 1.31
SPIN1-206ENST00000485804 USP17L5A8MUK1 530 aa23.24■■□□□ 1.31
SPIN1-206ENST00000485804 NPM3O75607 178 aaKnown RBP23.24■■□□□ 1.31
SPIN1-206ENST00000485804 CAP2P40123 477 aa23.24■■□□□ 1.31
SPIN1-206ENST00000485804 GCLCP48506 637 aaPredicted RBP23.24■■□□□ 1.31
SPIN1-206ENST00000485804 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
SPIN1-206ENST00000485804 TRIM34Q9BYJ4 488 aa23.24■■□□□ 1.31
SPIN1-206ENST00000485804 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
SPIN1-206ENST00000485804 BCAR3O75815 825 aa23.23■■□□□ 1.31
SPIN1-206ENST00000485804 GNAI2P04899 355 aa23.23■■□□□ 1.31
SPIN1-206ENST00000485804 UQCRFS1P1P0C7P4 283 aa23.23■■□□□ 1.31
SPIN1-206ENST00000485804 SH3RF3Q8TEJ3 882 aaPredicted RBP23.23■■□□□ 1.31
SPIN1-206ENST00000485804 PAWRQ96IZ0 340 aaKnown RBP23.23■■□□□ 1.31
SPIN1-206ENST00000485804 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.23■■□□□ 1.314e-6■■■■□ 23.5
SPIN1-206ENST00000485804 CAPN2P17655 700 aa23.22■■□□□ 1.31
SPIN1-206ENST00000485804 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
SPIN1-206ENST00000485804 NECAB2Q7Z6G3 386 aa23.22■■□□□ 1.31
SPIN1-206ENST00000485804 ASCC2Q9H1I8 757 aaPredicted RBP23.22■■□□□ 1.31
SPIN1-206ENST00000485804 PAK6Q9NQU5 681 aaPredicted RBP23.22■■□□□ 1.31
SPIN1-206ENST00000485804 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
SPIN1-206ENST00000485804 LOC285556D6RIA3 1793 aa23.22■■□□□ 1.31
SPIN1-206ENST00000485804 BAG3O95817 575 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 MCAMP43121 646 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 IRX3P78415 501 aaPredicted RBP23.21■■□□□ 1.31
SPIN1-206ENST00000485804 OS9Q13438 667 aaPredicted RBP23.21■■□□□ 1.31
SPIN1-206ENST00000485804 TTC39AQ5SRH9 613 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
SPIN1-206ENST00000485804 MIER1Q8N108 512 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 CLUAP1Q96AJ1 413 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 AATFQ9NY61 560 aaKnown RBP eCLIP23.21■■□□□ 1.31
SPIN1-206ENST00000485804 TMOD4Q9NZQ9 345 aa23.21■■□□□ 1.31
SPIN1-206ENST00000485804 HERC5Q9UII4 1024 aaKnown RBP23.21■■□□□ 1.31
SPIN1-206ENST00000485804 COL2A1P02458 1487 aaPredicted RBP23.2■■□□□ 1.3
SPIN1-206ENST00000485804 PNMA6EA0A0J9YXQ4 647 aa23.2■■□□□ 1.3
SPIN1-206ENST00000485804 HMGCRP04035 888 aa23.2■■□□□ 1.3
SPIN1-206ENST00000485804 CRACR2BQ8N4Y2 399 aaPredicted RBP23.2■■□□□ 1.3
SPIN1-206ENST00000485804 PI4KBQ9UBF8 816 aa23.2■■□□□ 1.3
SPIN1-206ENST00000485804 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
SPIN1-206ENST00000485804 MTMR2Q13614 643 aa23.19■■□□□ 1.3
SPIN1-206ENST00000485804 RRP1BQ14684 758 aaKnown RBP23.19■■□□□ 1.3
SPIN1-206ENST00000485804 MAPKAPK5Q8IW41 473 aa23.19■■□□□ 1.3
SPIN1-206ENST00000485804 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
SPIN1-206ENST00000485804 TGFBRAP1Q8WUH2 860 aa23.19■■□□□ 1.3
SPIN1-206ENST00000485804 HMX1Q9NP08 348 aaPredicted RBP23.19■■□□□ 1.3
SPIN1-206ENST00000485804 STAP2Q9UGK3 403 aa23.19■■□□□ 1.3
SPIN1-206ENST00000485804 PLCG2P16885 1265 aa23.18■■□□□ 1.3
SPIN1-206ENST00000485804 CCDC158Q5M9N0 1113 aa23.18■■□□□ 1.3
SPIN1-206ENST00000485804 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
SPIN1-206ENST00000485804 CCAR1Q8IX12 1150 aaKnown RBP23.18■■□□□ 1.3
SPIN1-206ENST00000485804 C7orf61Q8IZ16 206 aa23.18■■□□□ 1.3
SPIN1-206ENST00000485804 CRISPLD2Q9H0B8 497 aa23.18■■□□□ 1.3
SPIN1-206ENST00000485804 DHX36Q9H2U1 1008 aaKnown RBP23.18■■□□□ 1.3
SPIN1-206ENST00000485804 CYP2B6P20813 491 aa23.17■■□□□ 1.3
SPIN1-206ENST00000485804 POLA2Q14181 598 aa23.17■■□□□ 1.3
SPIN1-206ENST00000485804 SH3D19Q5HYK7 790 aa23.17■■□□□ 1.3
SPIN1-206ENST00000485804 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
SPIN1-206ENST00000485804 PRO3102Q9H379 93 aa23.17■■□□□ 1.3
SPIN1-206ENST00000485804 ZBED9Q6R2W3 1325 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 RPTORQ8N122 1335 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 ASNSP08243 561 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 TRIM32Q13049 653 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 GPR108Q9NPR9 543 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 ALPK3Q96L96 1907 aa23.16■■□□□ 1.3
SPIN1-206ENST00000485804 GDF11O95390 407 aa23.15■■□□□ 1.3
SPIN1-206ENST00000485804 BACE1P56817 501 aa23.15■■□□□ 1.3
SPIN1-206ENST00000485804 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
SPIN1-206ENST00000485804 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
SPIN1-206ENST00000485804 CWC22Q9HCG8 908 aaKnown RBP23.15■■□□□ 1.3
SPIN1-206ENST00000485804 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
SPIN1-206ENST00000485804 A0A1W2PPC1 479 aa23.14■■□□□ 1.29
SPIN1-206ENST00000485804 ANKLE1Q8NAG6 615 aa23.14■■□□□ 1.29
SPIN1-206ENST00000485804 P2RX7Q99572 595 aaKnown RBP23.14■■□□□ 1.29
SPIN1-206ENST00000485804 NUDT12Q9BQG2 462 aa23.14■■□□□ 1.29
SPIN1-206ENST00000485804 DBNDD2Q9BQY9 259 aa23.14■■□□□ 1.29
SPIN1-206ENST00000485804 WDR18Q9BV38 432 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms