RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 SEC62Q99442 399 aaKnown RBP11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 TMEM39BQ9GZU3 492 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
SHROOM3-207ENST00000485780 ATAD5Q96QE3 1844 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 GNAT2P19087 354 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 ATP8A2Q9NTI2 1148 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
SHROOM3-207ENST00000485780 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 TCP10Q12799 353 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 MAP3K11Q16584 847 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 TGFBRAP1Q8WUH2 860 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 SDR42E1Q8WUS8 393 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 IL25Q9H293 177 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 DHX36Q9H2U1 1008 aaKnown RBP11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
SHROOM3-207ENST00000485780 ROBO3Q96MS0 1386 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 UNCXA6NJT0 531 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 SGSM2O43147 1006 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 PRKAB2O43741 272 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 TBC1D12O60347 775 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 PICALMQ13492 652 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 CWC27Q6UX04 472 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 MAPKAPK5Q8IW41 473 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 ANKRD13AQ8IZ07 590 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 HOOK2Q96ED9 719 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 EHD4Q9H223 541 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 SLC4A4Q9Y6R1 1079 aa11.17□□□□□ -0.62
SHROOM3-207ENST00000485780 PHIPQ8WWQ0 1821 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 MANSC4A6NHS7 340 aaPredicted RBP11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 USP2O75604 605 aaPredicted RBP11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 USP5P45974 858 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 MFAP1P55081 439 aaKnown RBP11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 GABPAQ06546 454 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 DGKZQ13574 1117 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 ALX1Q15699 326 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 CCDC129Q6ZRS4 1044 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 CLMNQ96JQ2 1002 aa11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
SHROOM3-207ENST00000485780 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 CDC45O75419 566 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 HSPD1P10809 573 aaKnown RBP11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 TM4SF4P48230 202 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 INHBEP58166 350 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 DSCC1Q9BVC3 393 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 MCOLN1Q9GZU1 580 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 DNAJC18Q9H819 358 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 ELP3Q9H9T3 547 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 PI4KBQ9UBF8 816 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 HERC5Q9UII4 1024 aaKnown RBP11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 ZNF112Q9UJU3 913 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 PALD1Q9ULE6 856 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 CSADQ9Y600 493 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 PTPRFP10586 1907 aa11.15□□□□□ -0.62
SHROOM3-207ENST00000485780 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 PLCD1P51178 756 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 C12orf60Q5U649 245 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 CTR9Q6PD62 1173 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 MCM9Q9NXL9 1143 aa11.14□□□□□ -0.63
SHROOM3-207ENST00000485780 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 USP17L21D6R901 530 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 TBC1D8O95759 1140 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 FOXP4Q8IVH2 680 aaPredicted RBP11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 OPTNQ96CV9 577 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms