RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 GLRX3O76003 335 aaKnown RBP15.1■□□□□ 0.01
PTCD1-205ENST00000485746 MX1P20591 662 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 DGKZQ13574 1117 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
PTCD1-205ENST00000485746 TTC6Q86TZ1 520 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 ARMT1Q9H993 441 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 AKAP11Q9UKA4 1901 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 TCRBV5S4A2TA0A5A2 114 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 FKTNO75072 461 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 MBD4O95243 580 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 PTPRAP18433 802 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
PTCD1-205ENST00000485746 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
PTCD1-205ENST00000485746 DDRGK1Q96HY6 314 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 PTPN18Q99952 460 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
PTCD1-205ENST00000485746 ZFYVE28Q9HCC9 887 aa15.09■□□□□ 0.01
PTCD1-205ENST00000485746 CXCL11O14625 94 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 CAPN15O75808 1086 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 UBE3CQ15386 1083 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 LCORLQ8N3X6 602 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
PTCD1-205ENST00000485746 MCM9Q9NXL9 1143 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 MAST2Q6P0Q8 1798 aa15.08■□□□□ 0
PTCD1-205ENST00000485746 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0
PTCD1-205ENST00000485746 TRIM75PA6NK02 468 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 BTBD19C9JJ37 291 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 CAP2P40123 477 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 CRHR2Q13324 411 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 IFFO2Q5TF58 517 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 GADL1Q6ZQY3 521 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 FASTKD5Q7L8L6 764 aaKnown RBP15.07■□□□□ 0
PTCD1-205ENST00000485746 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 FSD1Q9BTV5 496 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 LNPKQ9C0E8 428 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 R3HDMLQ9H3Y0 253 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 KCNH4Q9UQ05 1017 aa15.07■□□□□ 0
PTCD1-205ENST00000485746 USP17L5A8MUK1 530 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 RNF113AO15541 343 aaKnown RBP15.06■□□□□ 0
PTCD1-205ENST00000485746 IGHDP01880 384 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
PTCD1-205ENST00000485746 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
PTCD1-205ENST00000485746 CFHR5Q9BXR6 569 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 AS3MTQ9HBK9 375 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 ATP8A2Q9NTI2 1148 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.06■□□□□ 0
PTCD1-205ENST00000485746 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
PTCD1-205ENST00000485746 PCNTO95613 3336 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 PDHXO00330 501 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 PRKAB2O43741 272 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 GDF11O95390 407 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 CHGBP05060 677 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
PTCD1-205ENST00000485746 ANKRD23Q86SG2 305 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 MCOLN1Q9GZU1 580 aa15.05■□□□□ -0
PTCD1-205ENST00000485746 DCP1AQ9NPI6 582 aaPredicted RBP15.05■□□□□ -0
PTCD1-205ENST00000485746 ASNSP08243 561 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 PDE1AP54750 535 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 SPP2Q13103 211 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
PTCD1-205ENST00000485746 NOM1Q5C9Z4 860 aaKnown RBP15.04■□□□□ -0
PTCD1-205ENST00000485746 CHD1LQ86WJ1 897 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 SMC5Q8IY18 1101 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 ZNF280CQ8ND82 737 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 APPBP2Q92624 585 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 PUS7LQ9H0K6 701 aaKnown RBP15.04■□□□□ -0
PTCD1-205ENST00000485746 ZCCHC17Q9NP64 241 aaKnown RBP15.04■□□□□ -0
PTCD1-205ENST00000485746 CABP5Q9NP86 173 aa15.04■□□□□ -0
PTCD1-205ENST00000485746 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
PTCD1-205ENST00000485746 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
PTCD1-205ENST00000485746 APPP05067 770 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 PLCD1P51178 756 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 SP3Q02447 781 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 RRP1BQ14684 758 aaKnown RBP15.03■□□□□ -0
PTCD1-205ENST00000485746 KIF22Q14807 665 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 ARHGEF6Q15052 776 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
PTCD1-205ENST00000485746 METTL16Q86W50 562 aaKnown RBP15.03■□□□□ -0
PTCD1-205ENST00000485746 ERO1AQ96HE7 468 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 EHD4Q9H223 541 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 GINM1Q9NU53 330 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 OTOFQ9HC10 1997 aa15.03■□□□□ -0
PTCD1-205ENST00000485746 DOCK2Q92608 1830 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 NUCB1Q02818 461 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 OSBP2Q969R2 916 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 EVI5LQ96CN4 794 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 ABHD8Q96I13 439 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 PARK7Q99497 189 aaKnown RBP15.02■□□□□ -0
PTCD1-205ENST00000485746 DNAJC18Q9H819 358 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms